Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UPF3BQ9BZI7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UPF3BQ9BZI7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPF3BQ9BZI7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.05■□□□□ 0.96
UPF3BQ9BZI7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
UPF3BQ9BZI7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPF3BQ9BZI7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
UPF3BQ9BZI7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
UPF3BQ9BZI7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
UPF3BQ9BZI7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.05■□□□□ 0.96
UPF3BQ9BZI7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPF3BQ9BZI7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPF3BQ9BZI7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UPF3BQ9BZI7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.05■□□□□ 0.96
UPF3BQ9BZI7 LINC01238-205ENST00000567549 1107 ntBASIC21.05■□□□□ 0.96
UPF3BQ9BZI7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.05■□□□□ 0.96
UPF3BQ9BZI7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPF3BQ9BZI7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPF3BQ9BZI7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.05■□□□□ 0.96
UPF3BQ9BZI7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPF3BQ9BZI7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
UPF3BQ9BZI7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 KRT126P-201ENST00000549467 1181 ntBASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF3BQ9BZI7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 PRORSD1P-202ENST00000563365 2154 ntBASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UPF3BQ9BZI7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 LYSMD4-203ENST00000378904 2122 ntBASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 AL671277.2-201ENST00000458060 996 ntBASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms