Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 AL121761.2-201ENST00000598007 1648 ntBASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
PCDH11XQ9BZA7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH11XQ9BZA7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH11XQ9BZA7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDH11XQ9BZA7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH11XQ9BZA7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDH11XQ9BZA7 AC023141.5-201ENST00000458585 616 ntBASIC22.69■■□□□ 1.22
PCDH11XQ9BZA7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC22.69■■□□□ 1.22
PCDH11XQ9BZA7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH11XQ9BZA7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH11XQ9BZA7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH11XQ9BZA7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDH11XQ9BZA7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH11XQ9BZA7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
PCDH11XQ9BZA7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
PCDH11XQ9BZA7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH11XQ9BZA7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDH11XQ9BZA7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH11XQ9BZA7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC22.69■■□□□ 1.22
PCDH11XQ9BZA7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH11XQ9BZA7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH11XQ9BZA7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH11XQ9BZA7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH11XQ9BZA7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH11XQ9BZA7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22.68■■□□□ 1.22
PCDH11XQ9BZA7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH11XQ9BZA7 CALY-203ENST00000368558 825 ntTSL 5 BASIC22.68■■□□□ 1.22
PCDH11XQ9BZA7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH11XQ9BZA7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH11XQ9BZA7 PAWRP1-201ENST00000451083 565 ntBASIC22.68■■□□□ 1.22
PCDH11XQ9BZA7 HLA-J-203ENST00000494367 1087 ntBASIC22.68■■□□□ 1.22
PCDH11XQ9BZA7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC22.68■■□□□ 1.22
PCDH11XQ9BZA7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDH11XQ9BZA7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH11XQ9BZA7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDH11XQ9BZA7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH11XQ9BZA7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH11XQ9BZA7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH11XQ9BZA7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH11XQ9BZA7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
PCDH11XQ9BZA7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 SLC25A24-204ENST00000569674 2357 ntBASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 KRT18P55-202ENST00000578578 1546 ntBASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 AC112191.1-201ENST00000523689 701 ntBASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 AC004449.1-201ENST00000564240 433 ntBASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 AC093512.1-201ENST00000617969 520 ntBASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH11XQ9BZA7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 AL135999.2-201ENST00000622438 1686 ntBASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 AL513480.1-201ENST00000451731 511 ntBASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms