Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RGS5-219ENST00000528019 512 ntTSL 4 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 OR7E128P-201ENST00000532736 1024 ntBASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 AC008014.1-201ENST00000551503 829 ntTSL 3 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 LINC02544-201ENST00000564830 544 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 UBE2L4-201ENST00000587688 464 ntBASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 AC245884.9-201ENST00000596631 483 ntBASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 DSTNP2-202ENST00000602547 1105 ntBASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 AL360272.1-201ENST00000605501 585 ntBASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 AC091946.2-201ENST00000606105 291 ntBASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 Y_RNA.812-201ENST00000610788 101 ntBASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 RNU6-1192P-201ENST00000612197 107 ntBASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 Y_RNA.784-201ENST00000613803 101 ntBASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 Y_RNA.787-201ENST00000616522 101 ntBASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 Y_RNA.780-201ENST00000617336 101 ntBASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 RNU6-489P-201ENST00000618289 107 ntBASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 Y_RNA.801-201ENST00000619005 101 ntBASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 AC006453.5-201ENST00000636451 619 ntBASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 ZNF69-201ENST00000340180 1438 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 SH2D4A-202ENST00000518040 1697 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 HSP90B3P-201ENST00000415545 1567 ntBASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 AC092894.1-201ENST00000486726 1563 ntTSL 5 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 RNF126P1-201ENST00000567452 1320 ntBASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 AC099398.1-201ENST00000567919 2776 ntBASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 MTND5P1-201ENST00000445440 1375 ntBASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 ZNRD1-202ENST00000359374 743 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 TMEM252-201ENST00000377311 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 TAS2R40-201ENST00000408947 1043 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 RN7SKP97-201ENST00000410966 333 ntBASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 ZNF847P-201ENST00000412638 1077 ntBASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 NPM1P4-201ENST00000414095 812 ntBASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 HMGB1P49-201ENST00000418882 569 ntBASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 DUX4L9-201ENST00000449051 1259 ntBASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 RPL5P33-201ENST00000487833 905 ntBASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 AC104232.1-201ENST00000522106 875 ntTSL 3 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 AC016957.1-201ENST00000534895 309 ntBASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 AC019209.1-201ENST00000544399 486 ntTSL 2 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 ACTR3BP3-201ENST00000565577 979 ntBASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 AC009994.1-201ENST00000606889 253 ntBASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 U62317.3-201ENST00000608319 855 ntBASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 RNU6ATAC35P-201ENST00000609276 444 ntBASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 AL442067.2-201ENST00000614033 363 ntBASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 MIR6765-201ENST00000614092 87 ntBASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 AC109826.1-201ENST00000419865 1424 ntTSL 5 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-3Q9BYR6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC11.05□□□□□ -0.64
KRTAP3-3Q9BYR6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC11.05□□□□□ -0.64
KRTAP3-3Q9BYR6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC11.05□□□□□ -0.64
KRTAP3-3Q9BYR6 CCT4P2-201ENST00000233836 1548 ntBASIC11.05□□□□□ -0.64
KRTAP3-3Q9BYR6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC11.05□□□□□ -0.64
KRTAP3-3Q9BYR6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
KRTAP3-3Q9BYR6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
KRTAP3-3Q9BYR6 WISP3-201ENST00000230529 1235 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
KRTAP3-3Q9BYR6 PRB4-201ENST00000279575 916 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
KRTAP3-3Q9BYR6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC11.05□□□□□ -0.64
KRTAP3-3Q9BYR6 CCDC58-201ENST00000291458 720 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
KRTAP3-3Q9BYR6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
KRTAP3-3Q9BYR6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
KRTAP3-3Q9BYR6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms