Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.29■■□□□ 1
RTFDC1Q9BY42 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC21.29■■□□□ 1
RTFDC1Q9BY42 AC068137.2-201ENST00000605408 478 ntBASIC21.29■■□□□ 1
RTFDC1Q9BY42 MED16-214ENST00000617672 554 ntTSL 5 BASIC21.29■■□□□ 1
RTFDC1Q9BY42 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTFDC1Q9BY42 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTFDC1Q9BY42 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.29■■□□□ 1
RTFDC1Q9BY42 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.29■■□□□ 1
RTFDC1Q9BY42 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.28■■□□□ 1
RTFDC1Q9BY42 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTFDC1Q9BY42 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC21.28■■□□□ 1
RTFDC1Q9BY42 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.28■■□□□ 1
RTFDC1Q9BY42 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTFDC1Q9BY42 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.28■■□□□ 1
RTFDC1Q9BY42 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.28■■□□□ 1
RTFDC1Q9BY42 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.28■■□□□ 1
RTFDC1Q9BY42 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
RTFDC1Q9BY42 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.28■■□□□ 1
RTFDC1Q9BY42 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.28■■□□□ 1
RTFDC1Q9BY42 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.28■■□□□ 1
RTFDC1Q9BY42 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.28■■□□□ 1
RTFDC1Q9BY42 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC21.28■■□□□ 1
RTFDC1Q9BY42 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC21.28■■□□□ 1
RTFDC1Q9BY42 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.28■■□□□ 1
RTFDC1Q9BY42 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC21.28■■□□□ 1
RTFDC1Q9BY42 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC21.28■■□□□ 1
RTFDC1Q9BY42 LSM12-202ENST00000585388 942 ntTSL 3 BASIC21.28■■□□□ 1
RTFDC1Q9BY42 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.28■■□□□ 1
RTFDC1Q9BY42 AC022145.2-201ENST00000598203 171 ntBASIC21.28■■□□□ 1
RTFDC1Q9BY42 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC21.28■■□□□ 1
RTFDC1Q9BY42 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.28■■□□□ 1
RTFDC1Q9BY42 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
RTFDC1Q9BY42 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTFDC1Q9BY42 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RTFDC1Q9BY42 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.28■■□□□ 1
RTFDC1Q9BY42 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTFDC1Q9BY42 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.28■■□□□ 1
RTFDC1Q9BY42 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.28■■□□□ 1
RTFDC1Q9BY42 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.28■■□□□ 1
RTFDC1Q9BY42 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.28■■□□□ 1
RTFDC1Q9BY42 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTFDC1Q9BY42 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTFDC1Q9BY42 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
RTFDC1Q9BY42 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.27■■□□□ 1
RTFDC1Q9BY42 PI4KAP1-204ENST00000612579 1703 ntBASIC21.27■■□□□ 1
RTFDC1Q9BY42 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RTFDC1Q9BY42 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTFDC1Q9BY42 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.27■■□□□ 1
RTFDC1Q9BY42 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RTFDC1Q9BY42 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTFDC1Q9BY42 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
RTFDC1Q9BY42 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTFDC1Q9BY42 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.27■■□□□ 1
RTFDC1Q9BY42 WDR53-203ENST00000429115 683 ntTSL 2 BASIC21.27■■□□□ 1
RTFDC1Q9BY42 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC21.27■■□□□ 1
RTFDC1Q9BY42 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC21.27■■□□□ 1
RTFDC1Q9BY42 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.27■■□□□ 1
RTFDC1Q9BY42 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC21.27■■□□□ 1
RTFDC1Q9BY42 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTFDC1Q9BY42 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC21.27■■□□□ 1
RTFDC1Q9BY42 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTFDC1Q9BY42 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTFDC1Q9BY42 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.27■□□□□ 0.99
RTFDC1Q9BY42 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RTFDC1Q9BY42 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
RTFDC1Q9BY42 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.26■□□□□ 0.99
RTFDC1Q9BY42 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTFDC1Q9BY42 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTFDC1Q9BY42 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTFDC1Q9BY42 MYCLP1-201ENST00000372451 1075 ntBASIC21.26■□□□□ 0.99
RTFDC1Q9BY42 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTFDC1Q9BY42 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RTFDC1Q9BY42 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
RTFDC1Q9BY42 ADH5P3-201ENST00000433842 1137 ntBASIC21.26■□□□□ 0.99
RTFDC1Q9BY42 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC21.26■□□□□ 0.99
RTFDC1Q9BY42 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.26■□□□□ 0.99
RTFDC1Q9BY42 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RTFDC1Q9BY42 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTFDC1Q9BY42 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC21.26■□□□□ 0.99
RTFDC1Q9BY42 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
RTFDC1Q9BY42 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTFDC1Q9BY42 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.26■□□□□ 0.99
RTFDC1Q9BY42 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTFDC1Q9BY42 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RTFDC1Q9BY42 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21.26■□□□□ 0.99
RTFDC1Q9BY42 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTFDC1Q9BY42 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTFDC1Q9BY42 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTFDC1Q9BY42 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
RTFDC1Q9BY42 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTFDC1Q9BY42 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTFDC1Q9BY42 AC109322.1-201ENST00000524499 1264 ntBASIC21.25■□□□□ 0.99
RTFDC1Q9BY42 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC21.25■□□□□ 0.99
RTFDC1Q9BY42 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.25■□□□□ 0.99
RTFDC1Q9BY42 AC004449.1-201ENST00000564240 433 ntBASIC21.25■□□□□ 0.99
RTFDC1Q9BY42 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC21.25■□□□□ 0.99
RTFDC1Q9BY42 CYB561-216ENST00000582297 897 ntTSL 3 BASIC21.25■□□□□ 0.99
RTFDC1Q9BY42 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RTFDC1Q9BY42 AC093512.1-201ENST00000617969 520 ntBASIC21.25■□□□□ 0.99
RTFDC1Q9BY42 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms