Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AL096828.2-201ENST00000567259 1965 ntBASIC20.05■□□□□ 0.8
PTPN18Q99952 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPN18Q99952 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PTPN18Q99952 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN18Q99952 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPN18Q99952 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.05■□□□□ 0.8
PTPN18Q99952 ACTG1P4-201ENST00000425123 1122 ntBASIC20.05■□□□□ 0.8
PTPN18Q99952 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PTPN18Q99952 GAPDHP21-201ENST00000450301 1010 ntBASIC20.05■□□□□ 0.8
PTPN18Q99952 SPDYE11-202ENST00000450699 704 ntBASIC20.05■□□□□ 0.8
PTPN18Q99952 AC079140.1-201ENST00000508039 487 ntBASIC20.05■□□□□ 0.8
PTPN18Q99952 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN18Q99952 AC243562.1-201ENST00000560672 389 ntBASIC20.05■□□□□ 0.8
PTPN18Q99952 SPDYE9P-201ENST00000570642 692 ntBASIC20.05■□□□□ 0.8
PTPN18Q99952 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.05■□□□□ 0.8
PTPN18Q99952 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.05■□□□□ 0.8
PTPN18Q99952 SPDYE10P-202ENST00000612005 668 ntBASIC20.05■□□□□ 0.8
PTPN18Q99952 SPDYE8P-202ENST00000612377 668 ntBASIC20.05■□□□□ 0.8
PTPN18Q99952 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PTPN18Q99952 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN18Q99952 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PTPN18Q99952 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN18Q99952 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPN18Q99952 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN18Q99952 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.05■□□□□ 0.8
PTPN18Q99952 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPN18Q99952 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN18Q99952 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
PTPN18Q99952 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN18Q99952 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PTPN18Q99952 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN18Q99952 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN18Q99952 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN18Q99952 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PTPN18Q99952 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.04■□□□□ 0.8
PTPN18Q99952 SLC25A6P2-201ENST00000497974 877 ntBASIC20.04■□□□□ 0.8
PTPN18Q99952 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.04■□□□□ 0.8
PTPN18Q99952 FAM86C2P-203ENST00000528684 1004 ntBASIC20.04■□□□□ 0.8
PTPN18Q99952 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN18Q99952 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN18Q99952 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN18Q99952 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN18Q99952 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPN18Q99952 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.04■□□□□ 0.8
PTPN18Q99952 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPN18Q99952 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPN18Q99952 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN18Q99952 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN18Q99952 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN18Q99952 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN18Q99952 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN18Q99952 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN18Q99952 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN18Q99952 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN18Q99952 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN18Q99952 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN18Q99952 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN18Q99952 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN18Q99952 BAD-202ENST00000394531 631 ntTSL 3 BASIC20.03■□□□□ 0.8
PTPN18Q99952 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.03■□□□□ 0.8
PTPN18Q99952 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PTPN18Q99952 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.03■□□□□ 0.8
PTPN18Q99952 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.03■□□□□ 0.8
PTPN18Q99952 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.03■□□□□ 0.8
PTPN18Q99952 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.03■□□□□ 0.8
PTPN18Q99952 AP001059.3-201ENST00000619053 235 ntBASIC20.03■□□□□ 0.8
PTPN18Q99952 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN18Q99952 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.03■□□□□ 0.8
PTPN18Q99952 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN18Q99952 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.03■□□□□ 0.8
PTPN18Q99952 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.03■□□□□ 0.8
PTPN18Q99952 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN18Q99952 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.02■□□□□ 0.8
PTPN18Q99952 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN18Q99952 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN18Q99952 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.02■□□□□ 0.8
PTPN18Q99952 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.02■□□□□ 0.8
PTPN18Q99952 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.02■□□□□ 0.8
PTPN18Q99952 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN18Q99952 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.02■□□□□ 0.8
PTPN18Q99952 AC140658.5-201ENST00000438532 169 ntBASIC20.02■□□□□ 0.8
PTPN18Q99952 KLF2P3-201ENST00000451977 1087 ntBASIC20.02■□□□□ 0.8
PTPN18Q99952 AC002558.1-201ENST00000488906 803 ntBASIC20.02■□□□□ 0.8
PTPN18Q99952 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.02■□□□□ 0.8
PTPN18Q99952 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
PTPN18Q99952 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN18Q99952 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
PTPN18Q99952 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PTPN18Q99952 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN18Q99952 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN18Q99952 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN18Q99952 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN18Q99952 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN18Q99952 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PTPN18Q99952 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PTPN18Q99952 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PTPN18Q99952 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.02■□□□□ 0.79
PTPN18Q99952 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PTPN18Q99952 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.02■□□□□ 0.79
PTPN18Q99952 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms