Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAD9AQ99638 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.72■□□□□ 0.59
RAD9AQ99638 AC015911.4-201ENST00000588022 1070 ntBASIC18.72■□□□□ 0.59
RAD9AQ99638 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.72■□□□□ 0.59
RAD9AQ99638 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.72■□□□□ 0.59
RAD9AQ99638 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.72■□□□□ 0.59
RAD9AQ99638 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAD9AQ99638 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.72■□□□□ 0.59
RAD9AQ99638 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAD9AQ99638 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RAD9AQ99638 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAD9AQ99638 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAD9AQ99638 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAD9AQ99638 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAD9AQ99638 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RAD9AQ99638 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAD9AQ99638 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAD9AQ99638 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAD9AQ99638 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.71■□□□□ 0.59
RAD9AQ99638 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAD9AQ99638 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
RAD9AQ99638 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAD9AQ99638 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.71■□□□□ 0.59
RAD9AQ99638 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.71■□□□□ 0.59
RAD9AQ99638 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAD9AQ99638 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.71■□□□□ 0.59
RAD9AQ99638 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.71■□□□□ 0.59
RAD9AQ99638 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAD9AQ99638 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.71■□□□□ 0.59
RAD9AQ99638 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.71■□□□□ 0.59
RAD9AQ99638 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAD9AQ99638 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.71■□□□□ 0.59
RAD9AQ99638 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAD9AQ99638 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAD9AQ99638 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.71■□□□□ 0.59
RAD9AQ99638 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
RAD9AQ99638 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAD9AQ99638 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RAD9AQ99638 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAD9AQ99638 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RAD9AQ99638 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAD9AQ99638 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAD9AQ99638 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RAD9AQ99638 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAD9AQ99638 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAD9AQ99638 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.7■□□□□ 0.58
RAD9AQ99638 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAD9AQ99638 AC067863.1-201ENST00000494933 530 ntBASIC18.7■□□□□ 0.58
RAD9AQ99638 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RAD9AQ99638 AC069262.1-201ENST00000539058 672 ntBASIC18.7■□□□□ 0.58
RAD9AQ99638 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.7■□□□□ 0.58
RAD9AQ99638 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.7■□□□□ 0.58
RAD9AQ99638 AC006116.8-202ENST00000587620 1550 ntBASIC18.7■□□□□ 0.58
RAD9AQ99638 AJ011932.1-201ENST00000621707 465 ntBASIC18.7■□□□□ 0.58
RAD9AQ99638 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.7■□□□□ 0.58
RAD9AQ99638 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAD9AQ99638 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RAD9AQ99638 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAD9AQ99638 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAD9AQ99638 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAD9AQ99638 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.7■□□□□ 0.58
RAD9AQ99638 AC116562.4-201ENST00000641316 2276 ntBASIC18.7■□□□□ 0.58
RAD9AQ99638 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAD9AQ99638 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAD9AQ99638 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.69■□□□□ 0.58
RAD9AQ99638 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.69■□□□□ 0.58
RAD9AQ99638 MYCLP1-201ENST00000372451 1075 ntBASIC18.69■□□□□ 0.58
RAD9AQ99638 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.69■□□□□ 0.58
RAD9AQ99638 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.69■□□□□ 0.58
RAD9AQ99638 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.69■□□□□ 0.58
RAD9AQ99638 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.69■□□□□ 0.58
RAD9AQ99638 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
RAD9AQ99638 AC093520.2-201ENST00000561830 333 ntBASIC18.69■□□□□ 0.58
RAD9AQ99638 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAD9AQ99638 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.69■□□□□ 0.58
RAD9AQ99638 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.69■□□□□ 0.58
RAD9AQ99638 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
RAD9AQ99638 AC092919.2-201ENST00000623631 1645 ntBASIC18.69■□□□□ 0.58
RAD9AQ99638 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAD9AQ99638 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAD9AQ99638 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAD9AQ99638 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAD9AQ99638 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
RAD9AQ99638 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.69■□□□□ 0.58
RAD9AQ99638 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.69■□□□□ 0.58
RAD9AQ99638 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RAD9AQ99638 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD9AQ99638 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RAD9AQ99638 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.68■□□□□ 0.58
RAD9AQ99638 AL031598.1-201ENST00000561511 1773 ntBASIC18.68■□□□□ 0.58
RAD9AQ99638 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD9AQ99638 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAD9AQ99638 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.68■□□□□ 0.58
RAD9AQ99638 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD9AQ99638 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD9AQ99638 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD9AQ99638 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD9AQ99638 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD9AQ99638 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD9AQ99638 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms