Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
SCAF11Q99590 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCAF11Q99590 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
SCAF11Q99590 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC25.11■■□□□ 1.61
SCAF11Q99590 AC005225.4-201ENST00000557330 545 ntBASIC25.11■■□□□ 1.61
SCAF11Q99590 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SCAF11Q99590 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC25.11■■□□□ 1.61
SCAF11Q99590 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC25.11■■□□□ 1.61
SCAF11Q99590 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC25.11■■□□□ 1.61
SCAF11Q99590 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC25.11■■□□□ 1.61
SCAF11Q99590 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCAF11Q99590 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCAF11Q99590 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCAF11Q99590 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
SCAF11Q99590 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCAF11Q99590 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCAF11Q99590 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SCAF11Q99590 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC25.1■■□□□ 1.61
SCAF11Q99590 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
SCAF11Q99590 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCAF11Q99590 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCAF11Q99590 POLD4-211ENST00000539074 714 ntTSL 3 BASIC25.1■■□□□ 1.61
SCAF11Q99590 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SCAF11Q99590 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC25.1■■□□□ 1.61
SCAF11Q99590 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SCAF11Q99590 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCAF11Q99590 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCAF11Q99590 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCAF11Q99590 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCAF11Q99590 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SCAF11Q99590 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC25.1■■□□□ 1.61
SCAF11Q99590 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC25.09■■□□□ 1.61
SCAF11Q99590 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SCAF11Q99590 MIR661-201ENST00000384842 89 ntBASIC25.09■■□□□ 1.61
SCAF11Q99590 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCAF11Q99590 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
SCAF11Q99590 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCAF11Q99590 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
SCAF11Q99590 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCAF11Q99590 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC25.09■■□□□ 1.61
SCAF11Q99590 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC25.09■■□□□ 1.61
SCAF11Q99590 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC25.09■■□□□ 1.61
SCAF11Q99590 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCAF11Q99590 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
SCAF11Q99590 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC25.09■■□□□ 1.61
SCAF11Q99590 AC090164.3-201ENST00000610780 2143 ntBASIC25.09■■□□□ 1.61
SCAF11Q99590 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC25.09■■□□□ 1.61
SCAF11Q99590 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCAF11Q99590 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCAF11Q99590 DDX43P3-201ENST00000441064 443 ntBASIC25.09■■□□□ 1.61
SCAF11Q99590 CXCL1P1-201ENST00000502804 216 ntBASIC25.09■■□□□ 1.61
SCAF11Q99590 NMU-203ENST00000507338 658 ntTSL 3 BASIC25.09■■□□□ 1.61
SCAF11Q99590 RNA5SP421-201ENST00000516864 134 ntBASIC25.09■■□□□ 1.61
SCAF11Q99590 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC25.09■■□□□ 1.61
SCAF11Q99590 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SCAF11Q99590 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC25.09■■□□□ 1.61
SCAF11Q99590 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC25.09■■□□□ 1.61
SCAF11Q99590 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCAF11Q99590 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC25.08■■□□□ 1.61
SCAF11Q99590 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SCAF11Q99590 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
SCAF11Q99590 AC100803.2-201ENST00000562459 1963 ntBASIC25.08■■□□□ 1.61
SCAF11Q99590 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SCAF11Q99590 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SCAF11Q99590 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC25.08■■□□□ 1.61
SCAF11Q99590 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SCAF11Q99590 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC25.08■■□□□ 1.61
SCAF11Q99590 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SCAF11Q99590 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SCAF11Q99590 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SCAF11Q99590 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SCAF11Q99590 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC25.08■■□□□ 1.61
SCAF11Q99590 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SCAF11Q99590 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC25.08■■□□□ 1.61
SCAF11Q99590 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
SCAF11Q99590 GSAP-205ENST00000430584 600 ntTSL 5 BASIC25.08■■□□□ 1.6
SCAF11Q99590 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC25.08■■□□□ 1.6
SCAF11Q99590 DUX4L27-201ENST00000554796 1261 ntBASIC25.08■■□□□ 1.6
SCAF11Q99590 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC25.08■■□□□ 1.6
SCAF11Q99590 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.6
SCAF11Q99590 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC25.08■■□□□ 1.6
SCAF11Q99590 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
SCAF11Q99590 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC25.08■■□□□ 1.6
SCAF11Q99590 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
SCAF11Q99590 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC25.08■■□□□ 1.6
SCAF11Q99590 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC25.07■■□□□ 1.6
SCAF11Q99590 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
SCAF11Q99590 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SCAF11Q99590 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC25.07■■□□□ 1.6
SCAF11Q99590 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
SCAF11Q99590 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC25.07■■□□□ 1.6
SCAF11Q99590 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SCAF11Q99590 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SCAF11Q99590 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SCAF11Q99590 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC25.07■■□□□ 1.6
SCAF11Q99590 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC25.07■■□□□ 1.6
SCAF11Q99590 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
SCAF11Q99590 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC25.07■■□□□ 1.6
SCAF11Q99590 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC25.07■■□□□ 1.6
SCAF11Q99590 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms