Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 IGHV3-62-201ENST00000520057 340 ntBASIC28.89■■■□□ 2.22
IFT140Q96RY7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC28.89■■■□□ 2.22
IFT140Q96RY7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
IFT140Q96RY7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC28.88■■■□□ 2.21
IFT140Q96RY7 EFTUD1P1-204ENST00000560401 1798 ntBASIC28.88■■■□□ 2.21
IFT140Q96RY7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
IFT140Q96RY7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC28.88■■■□□ 2.21
IFT140Q96RY7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
IFT140Q96RY7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC28.88■■■□□ 2.21
IFT140Q96RY7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC28.88■■■□□ 2.21
IFT140Q96RY7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
IFT140Q96RY7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
IFT140Q96RY7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC28.88■■■□□ 2.21
IFT140Q96RY7 HILS1-202ENST00000545329 423 ntBASIC28.88■■■□□ 2.21
IFT140Q96RY7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC28.88■■■□□ 2.21
IFT140Q96RY7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
IFT140Q96RY7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
IFT140Q96RY7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
IFT140Q96RY7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC28.88■■■□□ 2.21
IFT140Q96RY7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
IFT140Q96RY7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
IFT140Q96RY7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC28.87■■■□□ 2.21
IFT140Q96RY7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
IFT140Q96RY7 AC022144.1-201ENST00000602255 1580 ntBASIC28.87■■■□□ 2.21
IFT140Q96RY7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
IFT140Q96RY7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC28.87■■■□□ 2.21
IFT140Q96RY7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
IFT140Q96RY7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
IFT140Q96RY7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
IFT140Q96RY7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC28.87■■■□□ 2.21
IFT140Q96RY7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC28.87■■■□□ 2.21
IFT140Q96RY7 AL009183.1-201ENST00000603760 355 ntBASIC28.87■■■□□ 2.21
IFT140Q96RY7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC28.87■■■□□ 2.21
IFT140Q96RY7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC28.87■■■□□ 2.21
IFT140Q96RY7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
IFT140Q96RY7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
IFT140Q96RY7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC28.86■■■□□ 2.21
IFT140Q96RY7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC28.86■■■□□ 2.21
IFT140Q96RY7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC28.86■■■□□ 2.21
IFT140Q96RY7 AC116407.2-201ENST00000613639 860 ntBASIC28.86■■■□□ 2.21
IFT140Q96RY7 AC073592.8-201ENST00000624126 511 ntBASIC28.86■■■□□ 2.21
IFT140Q96RY7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
IFT140Q96RY7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
IFT140Q96RY7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC28.85■■■□□ 2.21
IFT140Q96RY7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
IFT140Q96RY7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
IFT140Q96RY7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC28.85■■■□□ 2.21
IFT140Q96RY7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC28.85■■■□□ 2.21
IFT140Q96RY7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC28.85■■■□□ 2.21
IFT140Q96RY7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC28.85■■■□□ 2.21
IFT140Q96RY7 MIR4515-201ENST00000584082 81 ntBASIC28.85■■■□□ 2.21
IFT140Q96RY7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC28.85■■■□□ 2.21
IFT140Q96RY7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
IFT140Q96RY7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
IFT140Q96RY7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC28.85■■■□□ 2.21
IFT140Q96RY7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
IFT140Q96RY7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
IFT140Q96RY7 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
IFT140Q96RY7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
IFT140Q96RY7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
IFT140Q96RY7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC28.85■■■□□ 2.21
IFT140Q96RY7 AC109635.5-201ENST00000533593 962 ntBASIC28.85■■■□□ 2.21
IFT140Q96RY7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
IFT140Q96RY7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
IFT140Q96RY7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
IFT140Q96RY7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC28.84■■■□□ 2.21
IFT140Q96RY7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
IFT140Q96RY7 AC009949.1-201ENST00000623048 1830 ntBASIC28.84■■■□□ 2.21
IFT140Q96RY7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
IFT140Q96RY7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
IFT140Q96RY7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
IFT140Q96RY7 CLDN5-201ENST00000403084 2357 ntBASIC28.84■■■□□ 2.21
IFT140Q96RY7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
IFT140Q96RY7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC28.84■■■□□ 2.21
IFT140Q96RY7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC28.84■■■□□ 2.21
IFT140Q96RY7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
IFT140Q96RY7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC28.84■■■□□ 2.21
IFT140Q96RY7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
IFT140Q96RY7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC28.84■■■□□ 2.21
IFT140Q96RY7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC28.84■■■□□ 2.21
IFT140Q96RY7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC28.83■■■□□ 2.21
IFT140Q96RY7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
IFT140Q96RY7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
IFT140Q96RY7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
IFT140Q96RY7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC28.83■■■□□ 2.21
IFT140Q96RY7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC28.83■■■□□ 2.21
IFT140Q96RY7 SPDYE12P-201ENST00000618416 771 ntBASIC28.83■■■□□ 2.21
IFT140Q96RY7 MIR6799-201ENST00000620297 69 ntBASIC28.83■■■□□ 2.21
IFT140Q96RY7 AL590560.3-201ENST00000623350 461 ntBASIC28.83■■■□□ 2.21
IFT140Q96RY7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
IFT140Q96RY7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
IFT140Q96RY7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
IFT140Q96RY7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC28.83■■■□□ 2.2
IFT140Q96RY7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC28.82■■■□□ 2.2
IFT140Q96RY7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC28.82■■■□□ 2.2
IFT140Q96RY7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC28.82■■■□□ 2.2
IFT140Q96RY7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC28.82■■■□□ 2.2
IFT140Q96RY7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
IFT140Q96RY7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC28.82■■■□□ 2.2
IFT140Q96RY7 AC079776.1-201ENST00000401540 1152 ntBASIC28.82■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms