Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SNX27Q96L92 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNX27Q96L92 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNX27Q96L92 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
SNX27Q96L92 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19■□□□□ 0.63
SNX27Q96L92 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19■□□□□ 0.63
SNX27Q96L92 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19■□□□□ 0.63
SNX27Q96L92 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19■□□□□ 0.63
SNX27Q96L92 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19■□□□□ 0.63
SNX27Q96L92 AC107918.4-202ENST00000641623 219 ntBASIC19■□□□□ 0.63
SNX27Q96L92 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX27Q96L92 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SNX27Q96L92 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX27Q96L92 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX27Q96L92 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX27Q96L92 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX27Q96L92 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SNX27Q96L92 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
SNX27Q96L92 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX27Q96L92 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.99■□□□□ 0.63
SNX27Q96L92 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.99■□□□□ 0.63
SNX27Q96L92 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.99■□□□□ 0.63
SNX27Q96L92 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX27Q96L92 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.99■□□□□ 0.63
SNX27Q96L92 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNX27Q96L92 SLC25A6P5-201ENST00000435663 894 ntBASIC18.99■□□□□ 0.63
SNX27Q96L92 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.99■□□□□ 0.63
SNX27Q96L92 PRYP5-201ENST00000451909 266 ntBASIC18.99■□□□□ 0.63
SNX27Q96L92 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNX27Q96L92 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX27Q96L92 AC093909.1-201ENST00000504731 1122 ntBASIC18.99■□□□□ 0.63
SNX27Q96L92 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.99■□□□□ 0.63
SNX27Q96L92 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.99■□□□□ 0.63
SNX27Q96L92 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.99■□□□□ 0.63
SNX27Q96L92 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SNX27Q96L92 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.99■□□□□ 0.63
SNX27Q96L92 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.99■□□□□ 0.63
SNX27Q96L92 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.99■□□□□ 0.63
SNX27Q96L92 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.99■□□□□ 0.63
SNX27Q96L92 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.99■□□□□ 0.63
SNX27Q96L92 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX27Q96L92 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX27Q96L92 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.99■□□□□ 0.63
SNX27Q96L92 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX27Q96L92 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX27Q96L92 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX27Q96L92 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.98■□□□□ 0.63
SNX27Q96L92 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.98■□□□□ 0.63
SNX27Q96L92 AC006116.8-202ENST00000587620 1550 ntBASIC18.98■□□□□ 0.63
SNX27Q96L92 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX27Q96L92 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX27Q96L92 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNX27Q96L92 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.98■□□□□ 0.63
SNX27Q96L92 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX27Q96L92 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNX27Q96L92 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.98■□□□□ 0.63
SNX27Q96L92 RPS2P28-201ENST00000314255 741 ntBASIC18.98■□□□□ 0.63
SNX27Q96L92 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.98■□□□□ 0.63
SNX27Q96L92 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.98■□□□□ 0.63
SNX27Q96L92 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.98■□□□□ 0.63
SNX27Q96L92 LAGE3P1-201ENST00000425356 484 ntBASIC18.98■□□□□ 0.63
SNX27Q96L92 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.98■□□□□ 0.63
SNX27Q96L92 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SNX27Q96L92 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.98■□□□□ 0.63
SNX27Q96L92 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.98■□□□□ 0.63
SNX27Q96L92 AC012640.2-201ENST00000561606 901 ntBASIC18.98■□□□□ 0.63
SNX27Q96L92 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.98■□□□□ 0.63
SNX27Q96L92 AC139887.3-201ENST00000568585 713 ntBASIC18.98■□□□□ 0.63
SNX27Q96L92 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.98■□□□□ 0.63
SNX27Q96L92 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
SNX27Q96L92 AC079781.4-201ENST00000641908 219 ntBASIC18.98■□□□□ 0.63
SNX27Q96L92 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
SNX27Q96L92 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SNX27Q96L92 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNX27Q96L92 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX27Q96L92 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNX27Q96L92 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.98■□□□□ 0.63
SNX27Q96L92 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX27Q96L92 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SNX27Q96L92 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX27Q96L92 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNX27Q96L92 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNX27Q96L92 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNX27Q96L92 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNX27Q96L92 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.97■□□□□ 0.63
SNX27Q96L92 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.97■□□□□ 0.63
SNX27Q96L92 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNX27Q96L92 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.97■□□□□ 0.63
SNX27Q96L92 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.97■□□□□ 0.63
SNX27Q96L92 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.97■□□□□ 0.63
SNX27Q96L92 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.97■□□□□ 0.63
SNX27Q96L92 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.97■□□□□ 0.63
SNX27Q96L92 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.97■□□□□ 0.63
SNX27Q96L92 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.97■□□□□ 0.63
SNX27Q96L92 AC008735.5-201ENST00000623544 497 ntBASIC18.97■□□□□ 0.63
SNX27Q96L92 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SNX27Q96L92 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.97■□□□□ 0.63
SNX27Q96L92 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNX27Q96L92 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNX27Q96L92 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms