Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
SHDQ96IW2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.71■□□□□ 0.43
SHDQ96IW2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHDQ96IW2 AL513480.1-201ENST00000451731 511 ntBASIC17.71■□□□□ 0.43
SHDQ96IW2 AC093214.1-201ENST00000511688 1107 ntBASIC17.71■□□□□ 0.43
SHDQ96IW2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.71■□□□□ 0.43
SHDQ96IW2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.71■□□□□ 0.43
SHDQ96IW2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHDQ96IW2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHDQ96IW2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.71■□□□□ 0.43
SHDQ96IW2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHDQ96IW2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHDQ96IW2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.71■□□□□ 0.43
SHDQ96IW2 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHDQ96IW2 AC009093.7-201ENST00000623853 1223 ntBASIC17.71■□□□□ 0.43
SHDQ96IW2 Z92544.3-201ENST00000624747 417 ntBASIC17.71■□□□□ 0.43
SHDQ96IW2 AC138932.1-201ENST00000534164 6830 ntBASIC17.71■□□□□ 0.43
SHDQ96IW2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SHDQ96IW2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHDQ96IW2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
SHDQ96IW2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHDQ96IW2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.71■□□□□ 0.43
SHDQ96IW2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.71■□□□□ 0.43
SHDQ96IW2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHDQ96IW2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHDQ96IW2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.71■□□□□ 0.42
SHDQ96IW2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.71■□□□□ 0.42
SHDQ96IW2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.71■□□□□ 0.42
SHDQ96IW2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SHDQ96IW2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SHDQ96IW2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHDQ96IW2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SHDQ96IW2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHDQ96IW2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
SHDQ96IW2 CNN2P2-201ENST00000443536 909 ntBASIC17.7■□□□□ 0.42
SHDQ96IW2 CNN2P3-201ENST00000450201 906 ntBASIC17.7■□□□□ 0.42
SHDQ96IW2 TIMM8BP1-201ENST00000452384 211 ntBASIC17.7■□□□□ 0.42
SHDQ96IW2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.7■□□□□ 0.42
SHDQ96IW2 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.7■□□□□ 0.42
SHDQ96IW2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.7■□□□□ 0.42
SHDQ96IW2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.7■□□□□ 0.42
SHDQ96IW2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.7■□□□□ 0.42
SHDQ96IW2 AL136317.3-201ENST00000618497 906 ntBASIC17.7■□□□□ 0.42
SHDQ96IW2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHDQ96IW2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHDQ96IW2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHDQ96IW2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHDQ96IW2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHDQ96IW2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.7■□□□□ 0.42
SHDQ96IW2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.7■□□□□ 0.42
SHDQ96IW2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.7■□□□□ 0.42
SHDQ96IW2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHDQ96IW2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SHDQ96IW2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHDQ96IW2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
SHDQ96IW2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
SHDQ96IW2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.69■□□□□ 0.42
SHDQ96IW2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHDQ96IW2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHDQ96IW2 AL627223.1-201ENST00000416693 442 ntBASIC17.69■□□□□ 0.42
SHDQ96IW2 ACTG1P4-201ENST00000425123 1122 ntBASIC17.69■□□□□ 0.42
SHDQ96IW2 BASP1P1-201ENST00000430708 665 ntBASIC17.69■□□□□ 0.42
SHDQ96IW2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.69■□□□□ 0.42
SHDQ96IW2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHDQ96IW2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.69■□□□□ 0.42
SHDQ96IW2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.69■□□□□ 0.42
SHDQ96IW2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.69■□□□□ 0.42
SHDQ96IW2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHDQ96IW2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.69■□□□□ 0.42
SHDQ96IW2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.69■□□□□ 0.42
SHDQ96IW2 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.69■□□□□ 0.42
SHDQ96IW2 AC026120.1-201ENST00000611536 926 ntBASIC17.69■□□□□ 0.42
SHDQ96IW2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.69■□□□□ 0.42
SHDQ96IW2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.69■□□□□ 0.42
SHDQ96IW2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
SHDQ96IW2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHDQ96IW2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHDQ96IW2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHDQ96IW2 AC006116.8-202ENST00000587620 1550 ntBASIC17.69■□□□□ 0.42
SHDQ96IW2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHDQ96IW2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.69■□□□□ 0.42
SHDQ96IW2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.69■□□□□ 0.42
SHDQ96IW2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SHDQ96IW2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHDQ96IW2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SHDQ96IW2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SHDQ96IW2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SHDQ96IW2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHDQ96IW2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.68■□□□□ 0.42
SHDQ96IW2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.68■□□□□ 0.42
SHDQ96IW2 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.68■□□□□ 0.42
SHDQ96IW2 AC005034.1-201ENST00000426657 489 ntBASIC17.68■□□□□ 0.42
SHDQ96IW2 AC005237.2-201ENST00000434368 219 ntBASIC17.68■□□□□ 0.42
SHDQ96IW2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SHDQ96IW2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.68■□□□□ 0.42
SHDQ96IW2 AC002558.1-201ENST00000488906 803 ntBASIC17.68■□□□□ 0.42
SHDQ96IW2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.68■□□□□ 0.42
SHDQ96IW2 AC093520.2-201ENST00000561830 333 ntBASIC17.68■□□□□ 0.42
SHDQ96IW2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.68■□□□□ 0.42
SHDQ96IW2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms