Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF31Q96EP0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF31Q96EP0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RNF31Q96EP0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF31Q96EP0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
RNF31Q96EP0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF31Q96EP0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
RNF31Q96EP0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RNF31Q96EP0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF31Q96EP0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF31Q96EP0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF31Q96EP0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF31Q96EP0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF31Q96EP0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF31Q96EP0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
RNF31Q96EP0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF31Q96EP0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF31Q96EP0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF31Q96EP0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF31Q96EP0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF31Q96EP0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF31Q96EP0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF31Q96EP0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
RNF31Q96EP0 RPS2P1-201ENST00000434010 821 ntBASIC17.02■□□□□ 0.32
RNF31Q96EP0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.02■□□□□ 0.32
RNF31Q96EP0 AF186996.4-201ENST00000467186 377 ntBASIC17.02■□□□□ 0.32
RNF31Q96EP0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF31Q96EP0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.02■□□□□ 0.32
RNF31Q96EP0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF31Q96EP0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF31Q96EP0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.02■□□□□ 0.32
RNF31Q96EP0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF31Q96EP0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF31Q96EP0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.02■□□□□ 0.32
RNF31Q96EP0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF31Q96EP0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF31Q96EP0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF31Q96EP0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RNF31Q96EP0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF31Q96EP0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF31Q96EP0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.02■□□□□ 0.31
RNF31Q96EP0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF31Q96EP0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
RNF31Q96EP0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF31Q96EP0 AC125634.1-201ENST00000438758 1403 ntBASIC17.02■□□□□ 0.31
RNF31Q96EP0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF31Q96EP0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF31Q96EP0 AC004817.3-201ENST00000602957 2129 ntBASIC17.02■□□□□ 0.31
RNF31Q96EP0 INTS4P1-201ENST00000438455 1935 ntBASIC17.02■□□□□ 0.31
RNF31Q96EP0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF31Q96EP0 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF31Q96EP0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF31Q96EP0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF31Q96EP0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF31Q96EP0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF31Q96EP0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF31Q96EP0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF31Q96EP0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF31Q96EP0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF31Q96EP0 BICD1-207ENST00000551848 1962 ntBASIC17.01■□□□□ 0.31
RNF31Q96EP0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF31Q96EP0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF31Q96EP0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF31Q96EP0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF31Q96EP0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF31Q96EP0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF31Q96EP0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF31Q96EP0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
RNF31Q96EP0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17■□□□□ 0.31
RNF31Q96EP0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17■□□□□ 0.31
RNF31Q96EP0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RNF31Q96EP0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RNF31Q96EP0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF31Q96EP0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF31Q96EP0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms