Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZNF428Q96B54 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZNF428Q96B54 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
ZNF428Q96B54 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC22.64■■□□□ 1.22
ZNF428Q96B54 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC22.64■■□□□ 1.22
ZNF428Q96B54 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ZNF428Q96B54 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
ZNF428Q96B54 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
ZNF428Q96B54 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
ZNF428Q96B54 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
ZNF428Q96B54 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC22.64■■□□□ 1.21
ZNF428Q96B54 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC22.64■■□□□ 1.21
ZNF428Q96B54 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC22.64■■□□□ 1.21
ZNF428Q96B54 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC22.64■■□□□ 1.21
ZNF428Q96B54 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC22.64■■□□□ 1.21
ZNF428Q96B54 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC22.64■■□□□ 1.21
ZNF428Q96B54 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ZNF428Q96B54 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC22.64■■□□□ 1.21
ZNF428Q96B54 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC22.64■■□□□ 1.21
ZNF428Q96B54 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC22.64■■□□□ 1.21
ZNF428Q96B54 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
ZNF428Q96B54 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ZNF428Q96B54 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
ZNF428Q96B54 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
ZNF428Q96B54 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ZNF428Q96B54 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ZNF428Q96B54 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ZNF428Q96B54 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
ZNF428Q96B54 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
ZNF428Q96B54 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC22.64■■□□□ 1.21
ZNF428Q96B54 AC243591.1-201ENST00000452967 1364 ntBASIC22.63■■□□□ 1.21
ZNF428Q96B54 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZNF428Q96B54 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZNF428Q96B54 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC22.63■■□□□ 1.21
ZNF428Q96B54 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC22.63■■□□□ 1.21
ZNF428Q96B54 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC22.63■■□□□ 1.21
ZNF428Q96B54 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZNF428Q96B54 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC22.63■■□□□ 1.21
ZNF428Q96B54 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZNF428Q96B54 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZNF428Q96B54 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC22.63■■□□□ 1.21
ZNF428Q96B54 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
ZNF428Q96B54 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
ZNF428Q96B54 IGHV3-52-201ENST00000519770 353 ntBASIC22.63■■□□□ 1.21
ZNF428Q96B54 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC22.63■■□□□ 1.21
ZNF428Q96B54 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC22.63■■□□□ 1.21
ZNF428Q96B54 COX5A-204ENST00000567270 579 ntTSL 3 BASIC22.63■■□□□ 1.21
ZNF428Q96B54 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC22.63■■□□□ 1.21
ZNF428Q96B54 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC22.63■■□□□ 1.21
ZNF428Q96B54 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC22.63■■□□□ 1.21
ZNF428Q96B54 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
ZNF428Q96B54 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZNF428Q96B54 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZNF428Q96B54 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZNF428Q96B54 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZNF428Q96B54 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
ZNF428Q96B54 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC22.62■■□□□ 1.21
ZNF428Q96B54 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC22.62■■□□□ 1.21
ZNF428Q96B54 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZNF428Q96B54 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZNF428Q96B54 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZNF428Q96B54 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZNF428Q96B54 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC22.62■■□□□ 1.21
ZNF428Q96B54 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC22.62■■□□□ 1.21
ZNF428Q96B54 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
ZNF428Q96B54 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
ZNF428Q96B54 PENK-208ENST00000523051 772 ntTSL 5 BASIC22.62■■□□□ 1.21
ZNF428Q96B54 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC22.62■■□□□ 1.21
ZNF428Q96B54 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC22.62■■□□□ 1.21
ZNF428Q96B54 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
ZNF428Q96B54 AL139327.4-201ENST00000612362 153 ntBASIC22.62■■□□□ 1.21
ZNF428Q96B54 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC22.62■■□□□ 1.21
ZNF428Q96B54 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZNF428Q96B54 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ZNF428Q96B54 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC22.62■■□□□ 1.21
ZNF428Q96B54 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ZNF428Q96B54 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC22.62■■□□□ 1.21
ZNF428Q96B54 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
ZNF428Q96B54 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
ZNF428Q96B54 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
ZNF428Q96B54 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC22.61■■□□□ 1.21
ZNF428Q96B54 IL9RP2-201ENST00000423948 1312 ntBASIC22.61■■□□□ 1.21
ZNF428Q96B54 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZNF428Q96B54 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
ZNF428Q96B54 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZNF428Q96B54 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
ZNF428Q96B54 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC22.61■■□□□ 1.21
ZNF428Q96B54 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
ZNF428Q96B54 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
ZNF428Q96B54 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZNF428Q96B54 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZNF428Q96B54 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZNF428Q96B54 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZNF428Q96B54 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
ZNF428Q96B54 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZNF428Q96B54 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZNF428Q96B54 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ZNF428Q96B54 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
ZNF428Q96B54 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
ZNF428Q96B54 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms