Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 AC004870.1-201ENST00000315132 882 ntBASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 FDX1P1-201ENST00000449115 551 ntBASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
ATRIPQ8WXE1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 AL023806.1-201ENST00000603994 1649 ntBASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATRIPQ8WXE1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.44■□□□□ 0.7
ATRIPQ8WXE1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.44■□□□□ 0.7
ATRIPQ8WXE1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATRIPQ8WXE1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATRIPQ8WXE1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATRIPQ8WXE1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATRIPQ8WXE1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATRIPQ8WXE1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.44■□□□□ 0.7
ATRIPQ8WXE1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.44■□□□□ 0.7
ATRIPQ8WXE1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATRIPQ8WXE1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.44■□□□□ 0.7
ATRIPQ8WXE1 AC111152.3-201ENST00000569699 673 ntBASIC19.44■□□□□ 0.7
ATRIPQ8WXE1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATRIPQ8WXE1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATRIPQ8WXE1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATRIPQ8WXE1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.44■□□□□ 0.7
ATRIPQ8WXE1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ATRIPQ8WXE1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.44■□□□□ 0.7
ATRIPQ8WXE1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ATRIPQ8WXE1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.44■□□□□ 0.7
ATRIPQ8WXE1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ATRIPQ8WXE1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 LINC01311-201ENST00000565162 1445 ntBASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 MIR149-201ENST00000384879 89 ntBASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms