Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBA3Q8TBC4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.68■□□□□ 0.58
UBA3Q8TBC4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBA3Q8TBC4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.68■□□□□ 0.58
UBA3Q8TBC4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.68■□□□□ 0.58
UBA3Q8TBC4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 TSPY19P-201ENST00000418461 509 ntBASIC18.67■□□□□ 0.58
UBA3Q8TBC4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 DUSP5P1-201ENST00000441325 1139 ntBASIC18.67■□□□□ 0.58
UBA3Q8TBC4 TSPY18P-201ENST00000441642 509 ntBASIC18.67■□□□□ 0.58
UBA3Q8TBC4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 KRT16P4-201ENST00000453883 522 ntBASIC18.67■□□□□ 0.58
UBA3Q8TBC4 AC122714.2-201ENST00000502787 707 ntBASIC18.67■□□□□ 0.58
UBA3Q8TBC4 KRT18P31-201ENST00000506277 1292 ntBASIC18.67■□□□□ 0.58
UBA3Q8TBC4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 AC109462.3-201ENST00000573934 613 ntBASIC18.67■□□□□ 0.58
UBA3Q8TBC4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 AL121772.3-201ENST00000610840 674 ntBASIC18.67■□□□□ 0.58
UBA3Q8TBC4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.67■□□□□ 0.58
UBA3Q8TBC4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 AC091304.2-201ENST00000564639 760 ntBASIC18.66■□□□□ 0.58
UBA3Q8TBC4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 AC019129.2-201ENST00000609837 1235 ntBASIC18.66■□□□□ 0.58
UBA3Q8TBC4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.66■□□□□ 0.58
UBA3Q8TBC4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBA3Q8TBC4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBA3Q8TBC4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
UBA3Q8TBC4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
UBA3Q8TBC4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBA3Q8TBC4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBA3Q8TBC4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
UBA3Q8TBC4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBA3Q8TBC4 AC132008.2-207ENST00000454517 770 ntBASIC18.65■□□□□ 0.58
UBA3Q8TBC4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.65■□□□□ 0.58
UBA3Q8TBC4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.65■□□□□ 0.58
UBA3Q8TBC4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.65■□□□□ 0.58
UBA3Q8TBC4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.65■□□□□ 0.58
UBA3Q8TBC4 LINC01451-201ENST00000623792 534 ntBASIC18.65■□□□□ 0.58
UBA3Q8TBC4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
UBA3Q8TBC4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBA3Q8TBC4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBA3Q8TBC4 AC133963.1-201ENST00000504166 1679 ntBASIC18.65■□□□□ 0.58
UBA3Q8TBC4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBA3Q8TBC4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
UBA3Q8TBC4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBA3Q8TBC4 KRT8P10-201ENST00000450021 1447 ntBASIC18.65■□□□□ 0.58
UBA3Q8TBC4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBA3Q8TBC4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UBA3Q8TBC4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UBA3Q8TBC4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.64■□□□□ 0.58
UBA3Q8TBC4 AL049757.1-201ENST00000616842 1596 ntBASIC18.64■□□□□ 0.58
UBA3Q8TBC4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.64■□□□□ 0.58
UBA3Q8TBC4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBA3Q8TBC4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms