Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 AC106820.2-201ENST00000563775 3264 ntBASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 HTR7P1-202ENST00000624664 4411 ntBASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH19Q8TAB3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
PCDH19Q8TAB3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 AL121894.2-201ENST00000602977 491 ntBASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 AC019129.2-201ENST00000609837 1235 ntBASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 AC092119.3-201ENST00000612618 583 ntBASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 KRT18P1-202ENST00000452408 1331 ntBASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PCDH19Q8TAB3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 AC002558.1-201ENST00000488906 803 ntBASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 TPSP2-201ENST00000561760 610 ntBASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 AC012313.1-201ENST00000593393 3059 ntBASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 NPAP1P7-201ENST00000613027 823 ntBASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PCDH19Q8TAB3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 AC233702.3-201ENST00000578656 1387 ntBASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms