Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.03■□□□□ -0
CLDND2Q8NHS1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.03■□□□□ -0
CLDND2Q8NHS1 MTCL1P1-201ENST00000446207 792 ntBASIC15.03■□□□□ -0
CLDND2Q8NHS1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.03■□□□□ -0
CLDND2Q8NHS1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.03■□□□□ -0
CLDND2Q8NHS1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.03■□□□□ -0
CLDND2Q8NHS1 AF238378.1-201ENST00000526806 358 ntBASIC15.03■□□□□ -0
CLDND2Q8NHS1 AL662844.1-201ENST00000546340 181 ntBASIC15.03■□□□□ -0
CLDND2Q8NHS1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDND2Q8NHS1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDND2Q8NHS1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CLDND2Q8NHS1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.03■□□□□ -0
CLDND2Q8NHS1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CLDND2Q8NHS1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CLDND2Q8NHS1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CLDND2Q8NHS1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CLDND2Q8NHS1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CLDND2Q8NHS1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.03■□□□□ -0
CLDND2Q8NHS1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.03■□□□□ -0
CLDND2Q8NHS1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDND2Q8NHS1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.03■□□□□ -0
CLDND2Q8NHS1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDND2Q8NHS1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CLDND2Q8NHS1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.02■□□□□ -0
CLDND2Q8NHS1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDND2Q8NHS1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDND2Q8NHS1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDND2Q8NHS1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDND2Q8NHS1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDND2Q8NHS1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDND2Q8NHS1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.02■□□□□ -0
CLDND2Q8NHS1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDND2Q8NHS1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDND2Q8NHS1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.02■□□□□ -0
CLDND2Q8NHS1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDND2Q8NHS1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
CLDND2Q8NHS1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDND2Q8NHS1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CLDND2Q8NHS1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDND2Q8NHS1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDND2Q8NHS1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDND2Q8NHS1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDND2Q8NHS1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.02■□□□□ -0
CLDND2Q8NHS1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDND2Q8NHS1 MRPL3P1-201ENST00000400109 1033 ntBASIC15.02■□□□□ -0
CLDND2Q8NHS1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDND2Q8NHS1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDND2Q8NHS1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.02■□□□□ -0
CLDND2Q8NHS1 AC079776.4-201ENST00000511039 504 ntBASIC15.02■□□□□ -0
CLDND2Q8NHS1 AC106795.1-205ENST00000512851 1056 ntBASIC15.02■□□□□ -0
CLDND2Q8NHS1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CLDND2Q8NHS1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.02■□□□□ -0
CLDND2Q8NHS1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.02■□□□□ -0
CLDND2Q8NHS1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CLDND2Q8NHS1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLDND2Q8NHS1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDND2Q8NHS1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDND2Q8NHS1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CLDND2Q8NHS1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLDND2Q8NHS1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDND2Q8NHS1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDND2Q8NHS1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDND2Q8NHS1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLDND2Q8NHS1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CLDND2Q8NHS1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CLDND2Q8NHS1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDND2Q8NHS1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 RCN1P2-201ENST00000398357 915 ntBASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 AC084018.2-201ENST00000613093 2607 ntBASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDND2Q8NHS1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms