Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 COX5BP2-201ENST00000392354 334 ntBASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 RPS2P1-201ENST00000434010 821 ntBASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 AC018712.1-201ENST00000455767 687 ntBASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 NKAPP1-205ENST00000585790 367 ntBASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNEP1R1Q8N9A8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 BX005266.1-201ENST00000473402 457 ntBASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 BX640515.1-201ENST00000617215 977 ntBASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 AP000867.4-201ENST00000641616 219 ntBASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 IL9RP2-201ENST00000423948 1312 ntBASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.65■□□□□ 0.1
CNEP1R1Q8N9A8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
CNEP1R1Q8N9A8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
CNEP1R1Q8N9A8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CNEP1R1Q8N9A8 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CNEP1R1Q8N9A8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CNEP1R1Q8N9A8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.64■□□□□ 0.09
CNEP1R1Q8N9A8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CNEP1R1Q8N9A8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.64■□□□□ 0.09
CNEP1R1Q8N9A8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CNEP1R1Q8N9A8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CNEP1R1Q8N9A8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CNEP1R1Q8N9A8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CNEP1R1Q8N9A8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CNEP1R1Q8N9A8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.64■□□□□ 0.09
CNEP1R1Q8N9A8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CNEP1R1Q8N9A8 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
CNEP1R1Q8N9A8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CNEP1R1Q8N9A8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CNEP1R1Q8N9A8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CNEP1R1Q8N9A8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CNEP1R1Q8N9A8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
CNEP1R1Q8N9A8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CNEP1R1Q8N9A8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms