Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 AC092850.2-201ENST00000623821 2697 ntBASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LSMEM1Q8N8F7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 AL645929.1-201ENST00000420084 975 ntBASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 TMPOP1-202ENST00000424642 1267 ntBASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 HCG11-201ENST00000411553 5696 ntBASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.16■□□□□ 0.18
LSMEM1Q8N8F7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LSMEM1Q8N8F7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms