Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.75■□□□□ 0.59
TTC39CQ8N584 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TTC39CQ8N584 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.75■□□□□ 0.59
TTC39CQ8N584 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TTC39CQ8N584 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TTC39CQ8N584 LETM1P2-201ENST00000597330 2178 ntBASIC18.75■□□□□ 0.59
TTC39CQ8N584 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TTC39CQ8N584 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TTC39CQ8N584 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TTC39CQ8N584 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TTC39CQ8N584 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39CQ8N584 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
TTC39CQ8N584 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39CQ8N584 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39CQ8N584 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39CQ8N584 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39CQ8N584 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.74■□□□□ 0.59
TTC39CQ8N584 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39CQ8N584 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39CQ8N584 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39CQ8N584 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39CQ8N584 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.74■□□□□ 0.59
TTC39CQ8N584 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39CQ8N584 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39CQ8N584 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39CQ8N584 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TTC39CQ8N584 AC106795.1-205ENST00000512851 1056 ntBASIC18.74■□□□□ 0.59
TTC39CQ8N584 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.74■□□□□ 0.59
TTC39CQ8N584 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.74■□□□□ 0.59
TTC39CQ8N584 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TTC39CQ8N584 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39CQ8N584 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39CQ8N584 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39CQ8N584 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.74■□□□□ 0.59
TTC39CQ8N584 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39CQ8N584 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39CQ8N584 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.74■□□□□ 0.59
TTC39CQ8N584 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39CQ8N584 AC018470.1-201ENST00000624790 3129 ntBASIC18.74■□□□□ 0.59
TTC39CQ8N584 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.74■□□□□ 0.59
TTC39CQ8N584 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39CQ8N584 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TTC39CQ8N584 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.73■□□□□ 0.59
TTC39CQ8N584 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39CQ8N584 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.73■□□□□ 0.59
TTC39CQ8N584 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39CQ8N584 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39CQ8N584 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39CQ8N584 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TTC39CQ8N584 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39CQ8N584 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.73■□□□□ 0.59
TTC39CQ8N584 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39CQ8N584 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TTC39CQ8N584 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.73■□□□□ 0.59
TTC39CQ8N584 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39CQ8N584 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39CQ8N584 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39CQ8N584 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39CQ8N584 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TTC39CQ8N584 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.73■□□□□ 0.59
TTC39CQ8N584 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39CQ8N584 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39CQ8N584 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.73■□□□□ 0.59
TTC39CQ8N584 AC132008.2-207ENST00000454517 770 ntBASIC18.73■□□□□ 0.59
TTC39CQ8N584 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.73■□□□□ 0.59
TTC39CQ8N584 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
TTC39CQ8N584 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39CQ8N584 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39CQ8N584 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39CQ8N584 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.73■□□□□ 0.59
TTC39CQ8N584 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39CQ8N584 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39CQ8N584 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.72■□□□□ 0.59
TTC39CQ8N584 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TTC39CQ8N584 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TTC39CQ8N584 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.72■□□□□ 0.59
TTC39CQ8N584 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.72■□□□□ 0.59
TTC39CQ8N584 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.72■□□□□ 0.59
TTC39CQ8N584 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TTC39CQ8N584 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TTC39CQ8N584 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TTC39CQ8N584 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.72■□□□□ 0.59
TTC39CQ8N584 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
TTC39CQ8N584 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.72■□□□□ 0.59
TTC39CQ8N584 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms