Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIX5Q8N196 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIX5Q8N196 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIX5Q8N196 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIX5Q8N196 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.02■□□□□ 0.48
SIX5Q8N196 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIX5Q8N196 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SIX5Q8N196 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIX5Q8N196 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.02■□□□□ 0.48
SIX5Q8N196 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SIX5Q8N196 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIX5Q8N196 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIX5Q8N196 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SIX5Q8N196 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SIX5Q8N196 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.02■□□□□ 0.48
SIX5Q8N196 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.02■□□□□ 0.48
SIX5Q8N196 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SIX5Q8N196 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.02■□□□□ 0.48
SIX5Q8N196 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.02■□□□□ 0.48
SIX5Q8N196 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.02■□□□□ 0.48
SIX5Q8N196 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
SIX5Q8N196 AC005082.1-201ENST00000413042 2259 ntBASIC18.02■□□□□ 0.47
SIX5Q8N196 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
SIX5Q8N196 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.02■□□□□ 0.47
SIX5Q8N196 AC132938.6-201ENST00000623828 1655 ntBASIC18.02■□□□□ 0.47
SIX5Q8N196 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
SIX5Q8N196 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
SIX5Q8N196 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.02■□□□□ 0.47
SIX5Q8N196 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SIX5Q8N196 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
SIX5Q8N196 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SIX5Q8N196 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.01■□□□□ 0.47
SIX5Q8N196 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SIX5Q8N196 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIX5Q8N196 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIX5Q8N196 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
SIX5Q8N196 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.01■□□□□ 0.47
SIX5Q8N196 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIX5Q8N196 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.01■□□□□ 0.47
SIX5Q8N196 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIX5Q8N196 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.01■□□□□ 0.47
SIX5Q8N196 MRPL20P1-201ENST00000400819 433 ntBASIC18.01■□□□□ 0.47
SIX5Q8N196 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.01■□□□□ 0.47
SIX5Q8N196 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SIX5Q8N196 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.01■□□□□ 0.47
SIX5Q8N196 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SIX5Q8N196 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.01■□□□□ 0.47
SIX5Q8N196 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.01■□□□□ 0.47
SIX5Q8N196 AC096734.2-201ENST00000562054 433 ntBASIC18.01■□□□□ 0.47
SIX5Q8N196 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.01■□□□□ 0.47
SIX5Q8N196 AC138761.1-201ENST00000584393 385 ntBASIC18.01■□□□□ 0.47
SIX5Q8N196 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SIX5Q8N196 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
SIX5Q8N196 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.01■□□□□ 0.47
SIX5Q8N196 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SIX5Q8N196 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
SIX5Q8N196 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIX5Q8N196 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.01■□□□□ 0.47
SIX5Q8N196 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIX5Q8N196 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
SIX5Q8N196 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
SIX5Q8N196 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
SIX5Q8N196 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SIX5Q8N196 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SIX5Q8N196 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18■□□□□ 0.47
SIX5Q8N196 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18■□□□□ 0.47
SIX5Q8N196 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SIX5Q8N196 SIRPAP1-201ENST00000448467 1770 ntBASIC18■□□□□ 0.47
SIX5Q8N196 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SIX5Q8N196 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SIX5Q8N196 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SIX5Q8N196 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18■□□□□ 0.47
SIX5Q8N196 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18■□□□□ 0.47
SIX5Q8N196 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18■□□□□ 0.47
SIX5Q8N196 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SIX5Q8N196 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18■□□□□ 0.47
SIX5Q8N196 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18■□□□□ 0.47
SIX5Q8N196 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18■□□□□ 0.47
SIX5Q8N196 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18■□□□□ 0.47
SIX5Q8N196 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18■□□□□ 0.47
SIX5Q8N196 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18■□□□□ 0.47
SIX5Q8N196 MIR4745-201ENST00000577608 62 ntBASIC18■□□□□ 0.47
SIX5Q8N196 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18■□□□□ 0.47
SIX5Q8N196 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SIX5Q8N196 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SIX5Q8N196 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SIX5Q8N196 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18■□□□□ 0.47
SIX5Q8N196 AC148477.5-201ENST00000625164 1645 ntBASIC18■□□□□ 0.47
SIX5Q8N196 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18■□□□□ 0.47
SIX5Q8N196 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18■□□□□ 0.47
SIX5Q8N196 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SIX5Q8N196 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SIX5Q8N196 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SIX5Q8N196 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18■□□□□ 0.47
SIX5Q8N196 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
SIX5Q8N196 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SIX5Q8N196 PC-214ENST00000628663 1470 ntTSL 5 BASIC18■□□□□ 0.47
SIX5Q8N196 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18■□□□□ 0.47
SIX5Q8N196 AC093484.2-201ENST00000580996 2166 ntBASIC18■□□□□ 0.47
SIX5Q8N196 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms