Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 AL022342.1-201ENST00000400363 863 ntBASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 AC109462.3-201ENST00000573934 613 ntBASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 MTDHP4-201ENST00000600287 670 ntBASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 AC004817.3-201ENST00000602957 2129 ntBASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 FAM215A-202ENST00000632077 792 ntBASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 AC079776.2-201ENST00000641154 1609 ntBASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 AL049757.1-201ENST00000616842 1596 ntBASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.59■□□□□ 0.57
SCN4BQ8IWT1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCN4BQ8IWT1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.58■□□□□ 0.57
SCN4BQ8IWT1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SCN4BQ8IWT1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCN4BQ8IWT1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCN4BQ8IWT1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.58■□□□□ 0.57
SCN4BQ8IWT1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SCN4BQ8IWT1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCN4BQ8IWT1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 RPS2P28-201ENST00000314255 741 ntBASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 OR7E14P-202ENST00000530490 1290 ntBASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 AC025062.2-201ENST00000605477 670 ntBASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 MIR7706-201ENST00000613747 67 ntBASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms