Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 AC004951.3-201ENST00000418645 1148 ntBASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.73■□□□□ 0.59
CCNI2Q6ZMN8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 AL023803.3-201ENST00000615559 522 ntBASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 AL162727.3-201ENST00000635661 2787 ntBASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CCNI2Q6ZMN8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 MIR149-201ENST00000384879 89 ntBASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 TSPY17P-201ENST00000450329 467 ntBASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 AL136038.3-201ENST00000561909 1096 ntBASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 AC012313.10-201ENST00000623509 926 ntBASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 LINC00304-203ENST00000565008 1864 ntBASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNI2Q6ZMN8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.71■□□□□ 0.58
CCNI2Q6ZMN8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CCNI2Q6ZMN8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
CCNI2Q6ZMN8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.7■□□□□ 0.58
CCNI2Q6ZMN8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.7■□□□□ 0.58
CCNI2Q6ZMN8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms