Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PPP4R4Q6NUP7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
PPP4R4Q6NUP7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PPP4R4Q6NUP7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
PPP4R4Q6NUP7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PPP4R4Q6NUP7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.3
PPP4R4Q6NUP7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 AP000593.1-201ENST00000393668 712 ntBASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 HMGA1P5-201ENST00000412453 271 ntBASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 AC012306.2-201ENST00000609350 630 ntBASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PPP4R4Q6NUP7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 CA15P1-201ENST00000481698 905 ntBASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 AC010203.1-204ENST00000548782 407 ntBASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 FAM87A-204ENST00000613235 858 ntBASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 AC105020.1-201ENST00000435356 2205 ntBASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PPP4R4Q6NUP7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 TERF1P1-201ENST00000311003 1181 ntBASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 RCN1P1-201ENST00000400413 996 ntBASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 FAM210CP-201ENST00000445714 574 ntBASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 AL353719.1-201ENST00000566847 864 ntBASIC16.93■□□□□ 0.3
PPP4R4Q6NUP7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms