Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 REXO1L3P-201ENST00000622202 1288 ntBASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 AC105339.1-204ENST00000636249 355 ntBASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 AC073130.3-201ENST00000624389 2278 ntBASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LYSMD4Q5XG99 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 AC009949.1-201ENST00000623048 1830 ntBASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 BCRP1-201ENST00000444246 691 ntBASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 AC002558.1-201ENST00000488906 803 ntBASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 AL096865.1-201ENST00000606796 927 ntBASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD4Q5XG99 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.21■□□□□ 0.34
LYSMD4Q5XG99 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LYSMD4Q5XG99 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.21■□□□□ 0.34
LYSMD4Q5XG99 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD4Q5XG99 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 AC100803.2-201ENST00000562459 1963 ntBASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 AC023141.5-201ENST00000458585 616 ntBASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms