Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 AP000523.1-201ENST00000398242 1049 ntBASIC17.81■□□□□ 0.44
LGSNQ5TDP6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 AL390955.1-201ENST00000428694 934 ntBASIC17.81■□□□□ 0.44
LGSNQ5TDP6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LGSNQ5TDP6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LGSNQ5TDP6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 BX276092.7-203ENST00000637198 1536 ntBASIC17.79■□□□□ 0.44
LGSNQ5TDP6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LGSNQ5TDP6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LGSNQ5TDP6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LGSNQ5TDP6 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LGSNQ5TDP6 PKD1P5-201ENST00000532415 10291 ntBASIC17.78■□□□□ 0.44
LGSNQ5TDP6 KRT17P2-201ENST00000300992 1314 ntBASIC17.78■□□□□ 0.44
LGSNQ5TDP6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
LGSNQ5TDP6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms