Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 AC096633.1-201ENST00000422446 749 ntBASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
LRIF1Q5T3J3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 IGHGP-201ENST00000390555 1178 ntBASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 AC145285.6-201ENST00000604632 637 ntBASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 AL031432.5-201ENST00000641059 760 ntBASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 PKD1P1-201ENST00000458669 6805 ntBASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIF1Q5T3J3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 SLC25A1P3-201ENST00000395415 828 ntBASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 STARP1-201ENST00000397973 869 ntBASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 SPDYE15P-201ENST00000424157 909 ntBASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 MTCL1P1-201ENST00000446207 792 ntBASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 AC002558.1-201ENST00000488906 803 ntBASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 AL441883.1-201ENST00000566170 1045 ntBASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LRIF1Q5T3J3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRIF1Q5T3J3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
LRIF1Q5T3J3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.61■□□□□ 0.25
LRIF1Q5T3J3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.61■□□□□ 0.25
LRIF1Q5T3J3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.61■□□□□ 0.25
LRIF1Q5T3J3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.61■□□□□ 0.25
LRIF1Q5T3J3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LRIF1Q5T3J3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.61■□□□□ 0.25
LRIF1Q5T3J3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRIF1Q5T3J3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRIF1Q5T3J3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.61■□□□□ 0.25
LRIF1Q5T3J3 AC068472.1-201ENST00000474589 881 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms