Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
LRRK2Q5S007 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRK2Q5S007 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRK2Q5S007 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRRK2Q5S007 AL353779.1-201ENST00000434793 351 ntBASIC15.14■□□□□ 0.01
LRRK2Q5S007 AC119751.2-201ENST00000504529 210 ntBASIC15.14■□□□□ 0.01
LRRK2Q5S007 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LRRK2Q5S007 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.14■□□□□ 0.01
LRRK2Q5S007 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.14■□□□□ 0.01
LRRK2Q5S007 AP000842.3-202ENST00000569238 1080 ntBASIC15.14■□□□□ 0.01
LRRK2Q5S007 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.14■□□□□ 0.01
LRRK2Q5S007 GPR182-203ENST00000622922 591 ntBASIC15.14■□□□□ 0.01
LRRK2Q5S007 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
LRRK2Q5S007 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
LRRK2Q5S007 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRK2Q5S007 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRK2Q5S007 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRRK2Q5S007 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.14■□□□□ 0.01
LRRK2Q5S007 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRK2Q5S007 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
LRRK2Q5S007 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.14■□□□□ 0.01
LRRK2Q5S007 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
LRRK2Q5S007 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRRK2Q5S007 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
LRRK2Q5S007 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.14■□□□□ 0.01
LRRK2Q5S007 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.14■□□□□ 0.01
LRRK2Q5S007 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.14■□□□□ 0.01
LRRK2Q5S007 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRK2Q5S007 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRK2Q5S007 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRK2Q5S007 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRK2Q5S007 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LRRK2Q5S007 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.14■□□□□ 0.01
LRRK2Q5S007 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRK2Q5S007 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
LRRK2Q5S007 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRK2Q5S007 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LRRK2Q5S007 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LRRK2Q5S007 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRK2Q5S007 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRK2Q5S007 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.13■□□□□ 0.01
LRRK2Q5S007 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.13■□□□□ 0.01
LRRK2Q5S007 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.13■□□□□ 0.01
LRRK2Q5S007 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRK2Q5S007 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.13■□□□□ 0.01
LRRK2Q5S007 AC004233.3-201ENST00000607794 1269 ntBASIC15.13■□□□□ 0.01
LRRK2Q5S007 AL138828.2-201ENST00000615812 383 ntBASIC15.13■□□□□ 0.01
LRRK2Q5S007 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.13■□□□□ 0.01
LRRK2Q5S007 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LRRK2Q5S007 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRK2Q5S007 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRK2Q5S007 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRK2Q5S007 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LRRK2Q5S007 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRK2Q5S007 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.13■□□□□ 0.01
LRRK2Q5S007 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRK2Q5S007 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.13■□□□□ 0.01
LRRK2Q5S007 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
LRRK2Q5S007 IGHV3-42-201ENST00000520410 361 ntBASIC15.13■□□□□ 0.01
LRRK2Q5S007 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
LRRK2Q5S007 KRT17P8-201ENST00000540749 863 ntBASIC15.13■□□□□ 0.01
LRRK2Q5S007 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRK2Q5S007 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
LRRK2Q5S007 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRK2Q5S007 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRK2Q5S007 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRK2Q5S007 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRK2Q5S007 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.13■□□□□ 0.01
LRRK2Q5S007 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRK2Q5S007 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRK2Q5S007 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRK2Q5S007 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRK2Q5S007 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRK2Q5S007 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRK2Q5S007 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
LRRK2Q5S007 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LRRK2Q5S007 AL391825.1-201ENST00000457671 1364 ntBASIC15.12■□□□□ 0.01
LRRK2Q5S007 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRK2Q5S007 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.12■□□□□ 0.01
LRRK2Q5S007 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRK2Q5S007 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.12■□□□□ 0.01
LRRK2Q5S007 INE1-201ENST00000456273 945 ntBASIC15.12■□□□□ 0.01
LRRK2Q5S007 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
LRRK2Q5S007 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.12■□□□□ 0.01
LRRK2Q5S007 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRK2Q5S007 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LRRK2Q5S007 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRK2Q5S007 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRK2Q5S007 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LRRK2Q5S007 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LRRK2Q5S007 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LRRK2Q5S007 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.12■□□□□ 0.01
LRRK2Q5S007 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.12■□□□□ 0.01
LRRK2Q5S007 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRK2Q5S007 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRK2Q5S007 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRK2Q5S007 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LRRK2Q5S007 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.12■□□□□ 0.01
LRRK2Q5S007 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRK2Q5S007 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms