Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 AP000523.1-201ENST00000398242 1049 ntBASIC13.55□□□□□ -0.24
HIST1H1AQ02539 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 SEC1P-202ENST00000473944 940 ntBASIC13.55□□□□□ -0.24
HIST1H1AQ02539 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.55□□□□□ -0.24
HIST1H1AQ02539 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H1AQ02539 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H1AQ02539 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST1H1AQ02539 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.53□□□□□ -0.24
HIST1H1AQ02539 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.53□□□□□ -0.24
HIST1H1AQ02539 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.53□□□□□ -0.24
HIST1H1AQ02539 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H1AQ02539 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H1AQ02539 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H1AQ02539 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
HIST1H1AQ02539 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H1AQ02539 AC011676.5-201ENST00000624864 2660 ntBASIC13.53□□□□□ -0.24
HIST1H1AQ02539 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H1AQ02539 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H1AQ02539 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
HIST1H1AQ02539 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HIST1H1AQ02539 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H1AQ02539 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H1AQ02539 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms