Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.25□□□□□ -0.13
CX3CL1P78423 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CL1P78423 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.25□□□□□ -0.13
CX3CL1P78423 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CX3CL1P78423 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CL1P78423 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CX3CL1P78423 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CL1P78423 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CL1P78423 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CL1P78423 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CL1P78423 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.25□□□□□ -0.13
CX3CL1P78423 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CL1P78423 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.25□□□□□ -0.13
CX3CL1P78423 AC005332.1-201ENST00000577698 1310 ntBASIC14.25□□□□□ -0.13
CX3CL1P78423 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CL1P78423 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.25□□□□□ -0.13
CX3CL1P78423 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CX3CL1P78423 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.25□□□□□ -0.13
CX3CL1P78423 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.25□□□□□ -0.13
CX3CL1P78423 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.25□□□□□ -0.13
CX3CL1P78423 KRT18P35-201ENST00000510488 1269 ntBASIC14.25□□□□□ -0.13
CX3CL1P78423 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
CX3CL1P78423 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.25□□□□□ -0.13
CX3CL1P78423 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CL1P78423 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
CX3CL1P78423 AC010331.1-201ENST00000611423 582 ntBASIC14.25□□□□□ -0.13
CX3CL1P78423 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.25□□□□□ -0.13
CX3CL1P78423 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CL1P78423 AL645608.8-201ENST00000606034 2086 ntBASIC14.25□□□□□ -0.13
CX3CL1P78423 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CX3CL1P78423 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CL1P78423 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CL1P78423 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CL1P78423 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CL1P78423 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.25□□□□□ -0.13
CX3CL1P78423 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CL1P78423 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CL1P78423 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.25□□□□□ -0.13
CX3CL1P78423 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CL1P78423 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CX3CL1P78423 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.24□□□□□ -0.13
CX3CL1P78423 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.24□□□□□ -0.13
CX3CL1P78423 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CX3CL1P78423 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CX3CL1P78423 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.24□□□□□ -0.13
CX3CL1P78423 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
CX3CL1P78423 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CX3CL1P78423 ARMC10P1-201ENST00000313754 855 ntBASIC14.24□□□□□ -0.13
CX3CL1P78423 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.24□□□□□ -0.13
CX3CL1P78423 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.24□□□□□ -0.13
CX3CL1P78423 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.24□□□□□ -0.13
CX3CL1P78423 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.24□□□□□ -0.13
CX3CL1P78423 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.24□□□□□ -0.13
CX3CL1P78423 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.24□□□□□ -0.13
CX3CL1P78423 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CX3CL1P78423 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.24□□□□□ -0.13
CX3CL1P78423 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CX3CL1P78423 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
CX3CL1P78423 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CX3CL1P78423 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.24□□□□□ -0.13
CX3CL1P78423 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.24□□□□□ -0.13
CX3CL1P78423 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.24□□□□□ -0.13
CX3CL1P78423 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.24□□□□□ -0.13
CX3CL1P78423 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CL1P78423 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CL1P78423 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CX3CL1P78423 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CX3CL1P78423 OR6D1P-203ENST00000641209 4860 ntBASIC14.23□□□□□ -0.13
CX3CL1P78423 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CL1P78423 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CX3CL1P78423 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
CX3CL1P78423 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.23□□□□□ -0.13
CX3CL1P78423 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CL1P78423 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CL1P78423 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.23□□□□□ -0.13
CX3CL1P78423 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CL1P78423 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms