Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 AL136317.3-201ENST00000618497 906 ntBASIC20.85■□□□□ 0.93
CNTNAP1P78357 AL805961.1-202ENST00000641562 540 ntBASIC20.85■□□□□ 0.93
CNTNAP1P78357 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP1P78357 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP1P78357 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP1P78357 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.85■□□□□ 0.93
CNTNAP1P78357 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP1P78357 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CNTNAP1P78357 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP1P78357 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP1P78357 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP1P78357 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.85■□□□□ 0.93
CNTNAP1P78357 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CNTNAP1P78357 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.85■□□□□ 0.93
CNTNAP1P78357 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP1P78357 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP1P78357 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP1P78357 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP1P78357 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP1P78357 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.85■□□□□ 0.93
CNTNAP1P78357 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP1P78357 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP1P78357 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.85■□□□□ 0.93
CNTNAP1P78357 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.85■□□□□ 0.93
CNTNAP1P78357 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP1P78357 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP1P78357 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP1P78357 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.85■□□□□ 0.93
CNTNAP1P78357 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.85■□□□□ 0.93
CNTNAP1P78357 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP1P78357 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.84■□□□□ 0.93
CNTNAP1P78357 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.84■□□□□ 0.93
CNTNAP1P78357 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP1P78357 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.84■□□□□ 0.93
CNTNAP1P78357 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.84■□□□□ 0.93
CNTNAP1P78357 AC009949.1-201ENST00000623048 1830 ntBASIC20.84■□□□□ 0.93
CNTNAP1P78357 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.84■□□□□ 0.93
CNTNAP1P78357 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.84■□□□□ 0.93
CNTNAP1P78357 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP1P78357 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.84■□□□□ 0.93
CNTNAP1P78357 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP1P78357 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP1P78357 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP1P78357 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP1P78357 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP1P78357 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.84■□□□□ 0.93
CNTNAP1P78357 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.84■□□□□ 0.93
CNTNAP1P78357 DDX43P3-201ENST00000441064 443 ntBASIC20.84■□□□□ 0.93
CNTNAP1P78357 ATP5G2P4-201ENST00000442175 420 ntBASIC20.84■□□□□ 0.93
CNTNAP1P78357 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
CNTNAP1P78357 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.84■□□□□ 0.93
CNTNAP1P78357 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP1P78357 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.84■□□□□ 0.93
CNTNAP1P78357 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP1P78357 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.83■□□□□ 0.93
CNTNAP1P78357 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.83■□□□□ 0.93
CNTNAP1P78357 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CNTNAP1P78357 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.83■□□□□ 0.93
CNTNAP1P78357 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.83■□□□□ 0.93
CNTNAP1P78357 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNTNAP1P78357 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.83■□□□□ 0.93
CNTNAP1P78357 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CNTNAP1P78357 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNTNAP1P78357 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
CNTNAP1P78357 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNTNAP1P78357 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CNTNAP1P78357 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNTNAP1P78357 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
CNTNAP1P78357 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.83■□□□□ 0.92
CNTNAP1P78357 AL627223.1-201ENST00000416693 442 ntBASIC20.83■□□□□ 0.92
CNTNAP1P78357 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC20.83■□□□□ 0.92
CNTNAP1P78357 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
CNTNAP1P78357 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.83■□□□□ 0.92
CNTNAP1P78357 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.83■□□□□ 0.92
CNTNAP1P78357 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.83■□□□□ 0.92
CNTNAP1P78357 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.83■□□□□ 0.92
CNTNAP1P78357 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CNTNAP1P78357 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.83■□□□□ 0.92
CNTNAP1P78357 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
CNTNAP1P78357 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNTNAP1P78357 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNTNAP1P78357 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.83■□□□□ 0.92
CNTNAP1P78357 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.83■□□□□ 0.92
CNTNAP1P78357 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNTNAP1P78357 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CNTNAP1P78357 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP1P78357 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CNTNAP1P78357 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.82■□□□□ 0.92
CNTNAP1P78357 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.82■□□□□ 0.92
CNTNAP1P78357 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP1P78357 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP1P78357 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP1P78357 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP1P78357 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.82■□□□□ 0.92
CNTNAP1P78357 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.82■□□□□ 0.92
CNTNAP1P78357 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.82■□□□□ 0.92
CNTNAP1P78357 OR7E47P-204ENST00000575924 449 ntBASIC20.82■□□□□ 0.92
CNTNAP1P78357 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.82■□□□□ 0.92
CNTNAP1P78357 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.82■□□□□ 0.92
CNTNAP1P78357 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms