Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.55■□□□□ 0.56
USP46P62068 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP46P62068 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.55■□□□□ 0.56
USP46P62068 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP46P62068 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP46P62068 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
USP46P62068 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.55■□□□□ 0.56
USP46P62068 AL049757.1-201ENST00000616842 1596 ntBASIC18.55■□□□□ 0.56
USP46P62068 AC004817.3-201ENST00000602957 2129 ntBASIC18.55■□□□□ 0.56
USP46P62068 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP46P62068 AC243591.1-201ENST00000452967 1364 ntBASIC18.55■□□□□ 0.56
USP46P62068 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP46P62068 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP46P62068 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP46P62068 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.54■□□□□ 0.56
USP46P62068 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
USP46P62068 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.54■□□□□ 0.56
USP46P62068 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.54■□□□□ 0.56
USP46P62068 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP46P62068 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
USP46P62068 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP46P62068 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.54■□□□□ 0.56
USP46P62068 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP46P62068 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP46P62068 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
USP46P62068 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
USP46P62068 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP46P62068 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.54■□□□□ 0.56
USP46P62068 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
USP46P62068 AL022342.1-201ENST00000400363 863 ntBASIC18.54■□□□□ 0.56
USP46P62068 RPS2P1-201ENST00000434010 821 ntBASIC18.54■□□□□ 0.56
USP46P62068 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
USP46P62068 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.54■□□□□ 0.56
USP46P62068 AC025062.2-201ENST00000605477 670 ntBASIC18.54■□□□□ 0.56
USP46P62068 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.54■□□□□ 0.56
USP46P62068 FAM215A-202ENST00000632077 792 ntBASIC18.54■□□□□ 0.56
USP46P62068 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.54■□□□□ 0.56
USP46P62068 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
USP46P62068 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP46P62068 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.54■□□□□ 0.56
USP46P62068 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP46P62068 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP46P62068 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP46P62068 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP46P62068 KRT18P55-202ENST00000578578 1546 ntBASIC18.54■□□□□ 0.56
USP46P62068 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP46P62068 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP46P62068 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP46P62068 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP46P62068 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP46P62068 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
USP46P62068 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
USP46P62068 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP46P62068 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.53■□□□□ 0.56
USP46P62068 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
USP46P62068 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.53■□□□□ 0.56
USP46P62068 AL590627.1-203ENST00000421194 1026 ntBASIC18.53■□□□□ 0.56
USP46P62068 BX005266.1-201ENST00000473402 457 ntBASIC18.53■□□□□ 0.56
USP46P62068 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.53■□□□□ 0.56
USP46P62068 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP46P62068 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.53■□□□□ 0.56
USP46P62068 AC019129.2-201ENST00000609837 1235 ntBASIC18.53■□□□□ 0.56
USP46P62068 AC120114.3-201ENST00000611923 658 ntBASIC18.53■□□□□ 0.56
USP46P62068 AL139288.1-201ENST00000623748 933 ntBASIC18.53■□□□□ 0.56
USP46P62068 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.53■□□□□ 0.56
USP46P62068 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP46P62068 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.53■□□□□ 0.56
USP46P62068 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
USP46P62068 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP46P62068 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP46P62068 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.53■□□□□ 0.56
USP46P62068 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
USP46P62068 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
USP46P62068 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.52■□□□□ 0.56
USP46P62068 AC079776.2-201ENST00000641154 1609 ntBASIC18.52■□□□□ 0.56
USP46P62068 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.52■□□□□ 0.56
USP46P62068 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP46P62068 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP46P62068 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP46P62068 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP46P62068 AL354751.1-201ENST00000412768 1863 ntBASIC18.52■□□□□ 0.56
USP46P62068 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP46P62068 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
USP46P62068 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
USP46P62068 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP46P62068 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
USP46P62068 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.52■□□□□ 0.56
USP46P62068 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP46P62068 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP46P62068 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP46P62068 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP46P62068 AC103564.2-201ENST00000432853 1299 ntBASIC18.52■□□□□ 0.56
USP46P62068 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.52■□□□□ 0.56
USP46P62068 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.52■□□□□ 0.56
USP46P62068 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP46P62068 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.52■□□□□ 0.56
USP46P62068 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP46P62068 BX640515.1-201ENST00000617215 977 ntBASIC18.52■□□□□ 0.56
USP46P62068 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
USP46P62068 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms