Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 MTCL1P1-201ENST00000446207 792 ntBASIC20.17■□□□□ 0.82
CHMP4BP1P59074 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 AL049840.3-201ENST00000602669 611 ntBASIC20.17■□□□□ 0.82
CHMP4BP1P59074 AL671883.3-201ENST00000603274 991 ntBASIC20.17■□□□□ 0.82
CHMP4BP1P59074 AC006538.3-201ENST00000612495 578 ntBASIC20.17■□□□□ 0.82
CHMP4BP1P59074 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 RNPS1P1-201ENST00000507437 918 ntBASIC20.16■□□□□ 0.82
CHMP4BP1P59074 AC073648.2-201ENST00000510116 352 ntBASIC20.16■□□□□ 0.82
CHMP4BP1P59074 RNA5SP419-201ENST00000515908 135 ntBASIC20.16■□□□□ 0.82
CHMP4BP1P59074 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 PRORSD1P-202ENST00000563365 2154 ntBASIC20.16■□□□□ 0.82
CHMP4BP1P59074 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
CHMP4BP1P59074 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP4BP1P59074 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CHMP4BP1P59074 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
CHMP4BP1P59074 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CHMP4BP1P59074 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CHMP4BP1P59074 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CHMP4BP1P59074 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP4BP1P59074 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
CHMP4BP1P59074 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP4BP1P59074 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP4BP1P59074 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP4BP1P59074 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CHMP4BP1P59074 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP4BP1P59074 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CHMP4BP1P59074 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP4BP1P59074 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CHMP4BP1P59074 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP4BP1P59074 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.14■□□□□ 0.81
CHMP4BP1P59074 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CHMP4BP1P59074 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP4BP1P59074 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.14■□□□□ 0.81
CHMP4BP1P59074 MIR574-201ENST00000385209 96 ntBASIC20.14■□□□□ 0.81
CHMP4BP1P59074 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms