Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.28■□□□□ 0.2
SMIM11AP58511 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.28■□□□□ 0.2
SMIM11AP58511 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SMIM11AP58511 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.28■□□□□ 0.2
SMIM11AP58511 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.28■□□□□ 0.2
SMIM11AP58511 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM11AP58511 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.28■□□□□ 0.2
SMIM11AP58511 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SMIM11AP58511 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM11AP58511 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM11AP58511 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM11AP58511 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM11AP58511 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.28■□□□□ 0.2
SMIM11AP58511 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM11AP58511 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM11AP58511 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM11AP58511 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SMIM11AP58511 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM11AP58511 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM11AP58511 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM11AP58511 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM11AP58511 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM11AP58511 KRT8P47-201ENST00000604727 1398 ntBASIC16.27■□□□□ 0.2
SMIM11AP58511 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM11AP58511 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SMIM11AP58511 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.27■□□□□ 0.2
SMIM11AP58511 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.27■□□□□ 0.2
SMIM11AP58511 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM11AP58511 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
SMIM11AP58511 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SMIM11AP58511 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM11AP58511 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.27■□□□□ 0.2
SMIM11AP58511 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
SMIM11AP58511 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SMIM11AP58511 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SMIM11AP58511 INGX-201ENST00000359239 846 ntBASIC16.27■□□□□ 0.2
SMIM11AP58511 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM11AP58511 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM11AP58511 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.27■□□□□ 0.2
SMIM11AP58511 AC005104.2-201ENST00000427818 678 ntBASIC16.27■□□□□ 0.2
SMIM11AP58511 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM11AP58511 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM11AP58511 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.27■□□□□ 0.2
SMIM11AP58511 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
SMIM11AP58511 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.27■□□□□ 0.2
SMIM11AP58511 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM11AP58511 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM11AP58511 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM11AP58511 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM11AP58511 AC009154.2-201ENST00000621177 724 ntBASIC16.27■□□□□ 0.2
SMIM11AP58511 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SMIM11AP58511 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM11AP58511 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SMIM11AP58511 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.27■□□□□ 0.2
SMIM11AP58511 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.27■□□□□ 0.2
SMIM11AP58511 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
SMIM11AP58511 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMIM11AP58511 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMIM11AP58511 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.27■□□□□ 0.19
SMIM11AP58511 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
SMIM11AP58511 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.27■□□□□ 0.19
SMIM11AP58511 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMIM11AP58511 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SMIM11AP58511 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
SMIM11AP58511 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11AP58511 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11AP58511 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11AP58511 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11AP58511 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11AP58511 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11AP58511 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.26■□□□□ 0.19
SMIM11AP58511 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11AP58511 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11AP58511 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11AP58511 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11AP58511 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11AP58511 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11AP58511 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11AP58511 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11AP58511 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11AP58511 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.26■□□□□ 0.19
SMIM11AP58511 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.26■□□□□ 0.19
SMIM11AP58511 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.26■□□□□ 0.19
SMIM11AP58511 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.26■□□□□ 0.19
SMIM11AP58511 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.26■□□□□ 0.19
SMIM11AP58511 AL355075.4-201ENST00000554988 638 ntBASIC16.26■□□□□ 0.19
SMIM11AP58511 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.26■□□□□ 0.19
SMIM11AP58511 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SMIM11AP58511 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.26■□□□□ 0.19
SMIM11AP58511 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.26■□□□□ 0.19
SMIM11AP58511 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.26■□□□□ 0.19
SMIM11AP58511 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
SMIM11AP58511 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11AP58511 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.26■□□□□ 0.19
SMIM11AP58511 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
SMIM11AP58511 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11AP58511 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11AP58511 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.26■□□□□ 0.19
SMIM11AP58511 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM11AP58511 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms