Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB38P57729 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB38P57729 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.58■□□□□ 0.24
RAB38P57729 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB38P57729 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB38P57729 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB38P57729 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB38P57729 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB38P57729 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RAB38P57729 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB38P57729 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB38P57729 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB38P57729 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB38P57729 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RAB38P57729 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB38P57729 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB38P57729 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB38P57729 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RAB38P57729 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB38P57729 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB38P57729 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB38P57729 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB38P57729 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB38P57729 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB38P57729 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB38P57729 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB38P57729 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB38P57729 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB38P57729 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB38P57729 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB38P57729 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.57■□□□□ 0.24
RAB38P57729 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.57■□□□□ 0.24
RAB38P57729 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB38P57729 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RAB38P57729 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB38P57729 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB38P57729 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.57■□□□□ 0.24
RAB38P57729 AL450487.1-201ENST00000426799 995 ntBASIC16.57■□□□□ 0.24
RAB38P57729 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB38P57729 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.57■□□□□ 0.24
RAB38P57729 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB38P57729 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.57■□□□□ 0.24
RAB38P57729 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB38P57729 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.57■□□□□ 0.24
RAB38P57729 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB38P57729 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RAB38P57729 AC073592.5-201ENST00000624854 528 ntBASIC16.57■□□□□ 0.24
RAB38P57729 AP000867.4-201ENST00000641616 219 ntBASIC16.57■□□□□ 0.24
RAB38P57729 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB38P57729 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB38P57729 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB38P57729 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB38P57729 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
RAB38P57729 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB38P57729 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB38P57729 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB38P57729 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB38P57729 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RAB38P57729 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB38P57729 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB38P57729 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB38P57729 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB38P57729 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB38P57729 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB38P57729 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB38P57729 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB38P57729 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB38P57729 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
RAB38P57729 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RAB38P57729 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB38P57729 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.56■□□□□ 0.24
RAB38P57729 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.56■□□□□ 0.24
RAB38P57729 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB38P57729 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
RAB38P57729 KRT126P-201ENST00000549467 1181 ntBASIC16.56■□□□□ 0.24
RAB38P57729 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB38P57729 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.56■□□□□ 0.24
RAB38P57729 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB38P57729 AP001269.4-201ENST00000609611 512 ntBASIC16.56■□□□□ 0.24
RAB38P57729 REXO1L6P-202ENST00000619970 1078 ntBASIC16.56■□□□□ 0.24
RAB38P57729 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB38P57729 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB38P57729 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB38P57729 OR6D1P-202ENST00000641007 5290 ntBASIC16.56■□□□□ 0.24
RAB38P57729 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB38P57729 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB38P57729 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RAB38P57729 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.56■□□□□ 0.24
RAB38P57729 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 PMPCAP1-201ENST00000508114 1576 ntBASIC16.55■□□□□ 0.24
RAB38P57729 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RAB38P57729 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
RAB38P57729 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.55■□□□□ 0.24
RAB38P57729 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB38P57729 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms