Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN6P56747 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN6P56747 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN6P56747 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN6P56747 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN6P56747 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN6P56747 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN6P56747 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN6P56747 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CLDN6P56747 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN6P56747 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN6P56747 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN6P56747 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN6P56747 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CLDN6P56747 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN6P56747 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CLDN6P56747 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLDN6P56747 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN6P56747 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN6P56747 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN6P56747 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN6P56747 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN6P56747 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN6P56747 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN6P56747 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN6P56747 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN6P56747 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN6P56747 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN6P56747 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN6P56747 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLDN6P56747 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.88■□□□□ 0.29
CLDN6P56747 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.88■□□□□ 0.29
CLDN6P56747 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN6P56747 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.88■□□□□ 0.29
CLDN6P56747 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN6P56747 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN6P56747 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN6P56747 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN6P56747 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN6P56747 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.88■□□□□ 0.29
CLDN6P56747 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLDN6P56747 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLDN6P56747 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN6P56747 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN6P56747 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN6P56747 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN6P56747 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CLDN6P56747 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN6P56747 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN6P56747 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CLDN6P56747 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN6P56747 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN6P56747 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN6P56747 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CLDN6P56747 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN6P56747 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.87■□□□□ 0.29
CLDN6P56747 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.87■□□□□ 0.29
CLDN6P56747 FAM58CP-201ENST00000435741 640 ntBASIC16.87■□□□□ 0.29
CLDN6P56747 AC011467.4-201ENST00000594891 528 ntBASIC16.87■□□□□ 0.29
CLDN6P56747 AC008667.4-201ENST00000607370 168 ntBASIC16.87■□□□□ 0.29
CLDN6P56747 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.87■□□□□ 0.29
CLDN6P56747 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN6P56747 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN6P56747 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN6P56747 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CLDN6P56747 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN6P56747 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN6P56747 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN6P56747 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN6P56747 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN6P56747 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN6P56747 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN6P56747 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN6P56747 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN6P56747 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN6P56747 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN6P56747 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CLDN6P56747 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN6P56747 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN6P56747 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CLDN6P56747 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN6P56747 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN6P56747 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN6P56747 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN6P56747 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN6P56747 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CLDN6P56747 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.86■□□□□ 0.29
CLDN6P56747 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.86■□□□□ 0.29
CLDN6P56747 TSEN15P1-201ENST00000423257 515 ntBASIC16.86■□□□□ 0.29
CLDN6P56747 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN6P56747 MKNK2P1-201ENST00000437526 628 ntBASIC16.86■□□□□ 0.29
CLDN6P56747 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.86■□□□□ 0.29
CLDN6P56747 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN6P56747 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN6P56747 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN6P56747 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN6P56747 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN6P56747 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN6P56747 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN6P56747 AC093512.1-201ENST00000617969 520 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms