Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CDH8P55286 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDH8P55286 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.82■□□□□ 0.6
CDH8P55286 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CDH8P55286 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH8P55286 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH8P55286 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CDH8P55286 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDH8P55286 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CDH8P55286 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CDH8P55286 AP005117.1-201ENST00000584346 1413 ntBASIC18.82■□□□□ 0.6
CDH8P55286 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH8P55286 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH8P55286 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH8P55286 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CDH8P55286 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.81■□□□□ 0.6
CDH8P55286 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH8P55286 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH8P55286 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH8P55286 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH8P55286 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.81■□□□□ 0.6
CDH8P55286 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CDH8P55286 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH8P55286 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.81■□□□□ 0.6
CDH8P55286 AP000867.4-201ENST00000641616 219 ntBASIC18.81■□□□□ 0.6
CDH8P55286 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH8P55286 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH8P55286 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.81■□□□□ 0.6
CDH8P55286 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH8P55286 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH8P55286 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH8P55286 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH8P55286 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH8P55286 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH8P55286 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH8P55286 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH8P55286 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH8P55286 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH8P55286 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH8P55286 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH8P55286 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH8P55286 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH8P55286 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH8P55286 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH8P55286 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH8P55286 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.8■□□□□ 0.6
CDH8P55286 AC005104.2-201ENST00000427818 678 ntBASIC18.8■□□□□ 0.6
CDH8P55286 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH8P55286 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.8■□□□□ 0.6
CDH8P55286 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.8■□□□□ 0.6
CDH8P55286 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CDH8P55286 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH8P55286 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH8P55286 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH8P55286 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH8P55286 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.8■□□□□ 0.6
CDH8P55286 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH8P55286 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CDH8P55286 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH8P55286 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH8P55286 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH8P55286 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH8P55286 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH8P55286 PMPCAP1-201ENST00000508114 1576 ntBASIC18.8■□□□□ 0.6
CDH8P55286 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH8P55286 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.79■□□□□ 0.6
CDH8P55286 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CDH8P55286 AC132938.5-201ENST00000624980 1813 ntBASIC18.79■□□□□ 0.6
CDH8P55286 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH8P55286 AL353593.2-201ENST00000602529 1483 ntBASIC18.79■□□□□ 0.6
CDH8P55286 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CDH8P55286 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.79■□□□□ 0.6
CDH8P55286 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.79■□□□□ 0.6
CDH8P55286 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH8P55286 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH8P55286 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH8P55286 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.79■□□□□ 0.6
CDH8P55286 AC079781.3-201ENST00000449110 356 ntBASIC18.79■□□□□ 0.6
CDH8P55286 SAPCD2P3-201ENST00000455031 850 ntBASIC18.79■□□□□ 0.6
CDH8P55286 AC106795.1-205ENST00000512851 1056 ntBASIC18.79■□□□□ 0.6
CDH8P55286 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.79■□□□□ 0.6
CDH8P55286 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CDH8P55286 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH8P55286 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH8P55286 MTDHP3-201ENST00000594186 672 ntBASIC18.79■□□□□ 0.6
CDH8P55286 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.79■□□□□ 0.6
CDH8P55286 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH8P55286 LINC01451-201ENST00000623792 534 ntBASIC18.79■□□□□ 0.6
CDH8P55286 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.79■□□□□ 0.6
CDH8P55286 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH8P55286 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.79■□□□□ 0.6
CDH8P55286 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH8P55286 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH8P55286 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH8P55286 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH8P55286 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CDH8P55286 AC138932.1-201ENST00000534164 6830 ntBASIC18.78■□□□□ 0.6
CDH8P55286 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDH8P55286 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDH8P55286 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms