Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.32■□□□□ 0.68
ACLYP53396 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACLYP53396 AC005498.2-205ENST00000593218 784 ntBASIC19.32■□□□□ 0.68
ACLYP53396 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.32■□□□□ 0.68
ACLYP53396 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.32■□□□□ 0.68
ACLYP53396 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACLYP53396 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACLYP53396 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACLYP53396 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ACLYP53396 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACLYP53396 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACLYP53396 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.31■□□□□ 0.68
ACLYP53396 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ACLYP53396 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.31■□□□□ 0.68
ACLYP53396 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACLYP53396 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACLYP53396 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACLYP53396 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACLYP53396 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.31■□□□□ 0.68
ACLYP53396 AC092474.2-201ENST00000424288 719 ntBASIC19.31■□□□□ 0.68
ACLYP53396 ACTG1P4-201ENST00000425123 1122 ntBASIC19.31■□□□□ 0.68
ACLYP53396 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.31■□□□□ 0.68
ACLYP53396 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.31■□□□□ 0.68
ACLYP53396 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
ACLYP53396 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ACLYP53396 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
ACLYP53396 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.31■□□□□ 0.68
ACLYP53396 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.31■□□□□ 0.68
ACLYP53396 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.31■□□□□ 0.68
ACLYP53396 LINC00628-201ENST00000628516 1289 ntBASIC19.31■□□□□ 0.68
ACLYP53396 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.31■□□□□ 0.68
ACLYP53396 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ACLYP53396 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACLYP53396 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ACLYP53396 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ACLYP53396 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACLYP53396 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACLYP53396 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.3■□□□□ 0.68
ACLYP53396 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.3■□□□□ 0.68
ACLYP53396 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACLYP53396 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
ACLYP53396 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.3■□□□□ 0.68
ACLYP53396 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACLYP53396 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACLYP53396 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ACLYP53396 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACLYP53396 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACLYP53396 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACLYP53396 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACLYP53396 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.3■□□□□ 0.68
ACLYP53396 AL513480.1-201ENST00000451731 511 ntBASIC19.3■□□□□ 0.68
ACLYP53396 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ACLYP53396 AC112191.1-201ENST00000523689 701 ntBASIC19.3■□□□□ 0.68
ACLYP53396 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.3■□□□□ 0.68
ACLYP53396 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ACLYP53396 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.3■□□□□ 0.68
ACLYP53396 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
ACLYP53396 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACLYP53396 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACLYP53396 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ACLYP53396 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ACLYP53396 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ACLYP53396 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ACLYP53396 CROCCP3-202ENST00000420820 1947 ntBASIC19.29■□□□□ 0.68
ACLYP53396 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACLYP53396 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACLYP53396 AC093677.2-201ENST00000600169 1863 ntBASIC19.29■□□□□ 0.68
ACLYP53396 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
ACLYP53396 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.29■□□□□ 0.68
ACLYP53396 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.29■□□□□ 0.68
ACLYP53396 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ACLYP53396 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACLYP53396 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ACLYP53396 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.29■□□□□ 0.68
ACLYP53396 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
ACLYP53396 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ACLYP53396 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ACLYP53396 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.29■□□□□ 0.68
ACLYP53396 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
ACLYP53396 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ACLYP53396 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
ACLYP53396 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.29■□□□□ 0.68
ACLYP53396 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACLYP53396 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ACLYP53396 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACLYP53396 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.29■□□□□ 0.68
ACLYP53396 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACLYP53396 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
ACLYP53396 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.28■□□□□ 0.68
ACLYP53396 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.28■□□□□ 0.68
ACLYP53396 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ACLYP53396 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACLYP53396 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
ACLYP53396 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.28■□□□□ 0.68
ACLYP53396 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.28■□□□□ 0.68
ACLYP53396 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
ACLYP53396 ADH5P3-201ENST00000433842 1137 ntBASIC19.28■□□□□ 0.68
ACLYP53396 FAM86GP-201ENST00000448322 971 ntBASIC19.28■□□□□ 0.68
ACLYP53396 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACLYP53396 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms