Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GTF2A1P52655 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
GTF2A1P52655 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
GTF2A1P52655 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GTF2A1P52655 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GTF2A1P52655 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.32■□□□□ 0.36
GTF2A1P52655 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
GTF2A1P52655 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.32■□□□□ 0.36
GTF2A1P52655 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.32■□□□□ 0.36
GTF2A1P52655 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
GTF2A1P52655 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC17.32■□□□□ 0.36
GTF2A1P52655 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.32■□□□□ 0.36
GTF2A1P52655 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GTF2A1P52655 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.32■□□□□ 0.36
GTF2A1P52655 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GTF2A1P52655 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.32■□□□□ 0.36
GTF2A1P52655 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.32■□□□□ 0.36
GTF2A1P52655 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.32■□□□□ 0.36
GTF2A1P52655 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
GTF2A1P52655 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
GTF2A1P52655 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
GTF2A1P52655 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
GTF2A1P52655 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GTF2A1P52655 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.32■□□□□ 0.36
GTF2A1P52655 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GTF2A1P52655 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GTF2A1P52655 AL138688.1-201ENST00000624851 1594 ntBASIC17.32■□□□□ 0.36
GTF2A1P52655 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.32■□□□□ 0.36
GTF2A1P52655 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GTF2A1P52655 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A1P52655 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A1P52655 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.31■□□□□ 0.36
GTF2A1P52655 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.31■□□□□ 0.36
GTF2A1P52655 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.31■□□□□ 0.36
GTF2A1P52655 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.31■□□□□ 0.36
GTF2A1P52655 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A1P52655 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A1P52655 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A1P52655 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A1P52655 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A1P52655 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.31■□□□□ 0.36
GTF2A1P52655 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
GTF2A1P52655 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
GTF2A1P52655 MCRIP2P1-201ENST00000394346 511 ntBASIC17.31■□□□□ 0.36
GTF2A1P52655 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.31■□□□□ 0.36
GTF2A1P52655 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.31■□□□□ 0.36
GTF2A1P52655 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A1P52655 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A1P52655 AC006058.4-201ENST00000624016 1670 ntBASIC17.31■□□□□ 0.36
GTF2A1P52655 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
GTF2A1P52655 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.31■□□□□ 0.36
GTF2A1P52655 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.31■□□□□ 0.36
GTF2A1P52655 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A1P52655 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
GTF2A1P52655 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
GTF2A1P52655 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A1P52655 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A1P52655 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A1P52655 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A1P52655 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A1P52655 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.31■□□□□ 0.36
GTF2A1P52655 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC17.31■□□□□ 0.36
GTF2A1P52655 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2A1P52655 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A1P52655 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A1P52655 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A1P52655 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
GTF2A1P52655 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GTF2A1P52655 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.3■□□□□ 0.36
GTF2A1P52655 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A1P52655 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A1P52655 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A1P52655 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A1P52655 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A1P52655 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.3■□□□□ 0.36
GTF2A1P52655 AL162412.1-201ENST00000567129 965 ntBASIC17.3■□□□□ 0.36
GTF2A1P52655 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A1P52655 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
GTF2A1P52655 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A1P52655 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A1P52655 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A1P52655 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.3■□□□□ 0.36
GTF2A1P52655 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
GTF2A1P52655 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A1P52655 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A1P52655 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A1P52655 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A1P52655 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
GTF2A1P52655 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A1P52655 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GTF2A1P52655 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A1P52655 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2A1P52655 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
GTF2A1P52655 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GTF2A1P52655 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
GTF2A1P52655 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
GTF2A1P52655 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms