Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP11P51784 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP11P51784 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP11P51784 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP11P51784 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.91■□□□□ 0.78
USP11P51784 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP11P51784 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP11P51784 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP11P51784 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP11P51784 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.91■□□□□ 0.78
USP11P51784 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
USP11P51784 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.91■□□□□ 0.78
USP11P51784 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.91■□□□□ 0.78
USP11P51784 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.91■□□□□ 0.78
USP11P51784 AL139288.1-201ENST00000623748 933 ntBASIC19.91■□□□□ 0.78
USP11P51784 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.91■□□□□ 0.78
USP11P51784 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP11P51784 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP11P51784 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
USP11P51784 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.91■□□□□ 0.78
USP11P51784 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP11P51784 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP11P51784 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP11P51784 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.9■□□□□ 0.78
USP11P51784 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP11P51784 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
USP11P51784 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP11P51784 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
USP11P51784 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP11P51784 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP11P51784 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP11P51784 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP11P51784 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP11P51784 AL020989.1-201ENST00000422979 469 ntBASIC19.9■□□□□ 0.78
USP11P51784 AC079781.3-201ENST00000449110 356 ntBASIC19.9■□□□□ 0.78
USP11P51784 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.9■□□□□ 0.78
USP11P51784 SCARNA2-201ENST00000458748 420 ntBASIC19.9■□□□□ 0.78
USP11P51784 STK19B-204ENST00000512515 211 ntBASIC19.9■□□□□ 0.78
USP11P51784 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP11P51784 AL160237.2-201ENST00000556165 472 ntBASIC19.9■□□□□ 0.78
USP11P51784 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.9■□□□□ 0.78
USP11P51784 AL139327.4-201ENST00000612362 153 ntBASIC19.9■□□□□ 0.78
USP11P51784 AL031008.1-201ENST00000619963 541 ntBASIC19.9■□□□□ 0.78
USP11P51784 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP11P51784 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.9■□□□□ 0.78
USP11P51784 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.9■□□□□ 0.78
USP11P51784 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP11P51784 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.9■□□□□ 0.78
USP11P51784 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.9■□□□□ 0.78
USP11P51784 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
USP11P51784 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP11P51784 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.9■□□□□ 0.78
USP11P51784 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.9■□□□□ 0.78
USP11P51784 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
USP11P51784 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
USP11P51784 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
USP11P51784 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
USP11P51784 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP11P51784 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
USP11P51784 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP11P51784 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.89■□□□□ 0.77
USP11P51784 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP11P51784 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP11P51784 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.89■□□□□ 0.77
USP11P51784 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP11P51784 KLF4P1-201ENST00000412782 1185 ntBASIC19.89■□□□□ 0.77
USP11P51784 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP11P51784 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.89■□□□□ 0.77
USP11P51784 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
USP11P51784 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.89■□□□□ 0.77
USP11P51784 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.89■□□□□ 0.77
USP11P51784 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.89■□□□□ 0.77
USP11P51784 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP11P51784 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.89■□□□□ 0.77
USP11P51784 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
USP11P51784 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.89■□□□□ 0.77
USP11P51784 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP11P51784 NKAPP1-205ENST00000585790 367 ntBASIC19.89■□□□□ 0.77
USP11P51784 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.89■□□□□ 0.77
USP11P51784 AC067852.2-201ENST00000590513 2313 ntBASIC19.89■□□□□ 0.77
USP11P51784 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP11P51784 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.89■□□□□ 0.77
USP11P51784 AC009336.1-201ENST00000608941 1553 ntBASIC19.89■□□□□ 0.77
USP11P51784 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.89■□□□□ 0.77
USP11P51784 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP11P51784 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP11P51784 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
USP11P51784 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.89■□□□□ 0.77
USP11P51784 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP11P51784 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
USP11P51784 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP11P51784 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP11P51784 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP11P51784 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
USP11P51784 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP11P51784 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.88■□□□□ 0.77
USP11P51784 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP11P51784 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
USP11P51784 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
USP11P51784 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms