Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GPC3P51654 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GPC3P51654 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.48■□□□□ 0.71
GPC3P51654 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC3P51654 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC3P51654 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC3P51654 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GPC3P51654 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.47■□□□□ 0.71
GPC3P51654 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
GPC3P51654 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GPC3P51654 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
GPC3P51654 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC3P51654 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.47■□□□□ 0.71
GPC3P51654 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC3P51654 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.47■□□□□ 0.71
GPC3P51654 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GPC3P51654 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.47■□□□□ 0.71
GPC3P51654 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GPC3P51654 MTDHP4-201ENST00000600287 670 ntBASIC19.47■□□□□ 0.71
GPC3P51654 AC073592.4-201ENST00000623827 446 ntBASIC19.47■□□□□ 0.71
GPC3P51654 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC3P51654 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GPC3P51654 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
GPC3P51654 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
GPC3P51654 SIRPAP1-201ENST00000448467 1770 ntBASIC19.47■□□□□ 0.71
GPC3P51654 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.47■□□□□ 0.71
GPC3P51654 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GPC3P51654 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.46■□□□□ 0.71
GPC3P51654 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC3P51654 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC3P51654 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC3P51654 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GPC3P51654 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC3P51654 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.46■□□□□ 0.71
GPC3P51654 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.46■□□□□ 0.71
GPC3P51654 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GPC3P51654 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
GPC3P51654 OR7E14P-202ENST00000530490 1290 ntBASIC19.46■□□□□ 0.71
GPC3P51654 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.46■□□□□ 0.71
GPC3P51654 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
GPC3P51654 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.46■□□□□ 0.71
GPC3P51654 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.46■□□□□ 0.71
GPC3P51654 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
GPC3P51654 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC3P51654 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC3P51654 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC3P51654 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
GPC3P51654 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
GPC3P51654 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
GPC3P51654 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GPC3P51654 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.46■□□□□ 0.71
GPC3P51654 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
GPC3P51654 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.45■□□□□ 0.7
GPC3P51654 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.45■□□□□ 0.7
GPC3P51654 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.45■□□□□ 0.7
GPC3P51654 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
GPC3P51654 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
GPC3P51654 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.45■□□□□ 0.7
GPC3P51654 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC3P51654 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GPC3P51654 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.45■□□□□ 0.7
GPC3P51654 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC3P51654 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC3P51654 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC3P51654 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.45■□□□□ 0.7
GPC3P51654 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
GPC3P51654 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.45■□□□□ 0.7
GPC3P51654 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
GPC3P51654 BX005266.1-201ENST00000473402 457 ntBASIC19.45■□□□□ 0.7
GPC3P51654 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GPC3P51654 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.45■□□□□ 0.7
GPC3P51654 AC012640.2-201ENST00000561606 901 ntBASIC19.45■□□□□ 0.7
GPC3P51654 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.45■□□□□ 0.7
GPC3P51654 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.45■□□□□ 0.7
GPC3P51654 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC3P51654 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.45■□□□□ 0.7
GPC3P51654 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC3P51654 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GPC3P51654 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC3P51654 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
GPC3P51654 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.45■□□□□ 0.7
GPC3P51654 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.45■□□□□ 0.7
GPC3P51654 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GPC3P51654 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
GPC3P51654 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
GPC3P51654 AC009949.1-201ENST00000623048 1830 ntBASIC19.44■□□□□ 0.7
GPC3P51654 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
GPC3P51654 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GPC3P51654 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
GPC3P51654 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GPC3P51654 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
GPC3P51654 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.44■□□□□ 0.7
GPC3P51654 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GPC3P51654 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.44■□□□□ 0.7
GPC3P51654 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.44■□□□□ 0.7
GPC3P51654 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.44■□□□□ 0.7
GPC3P51654 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.44■□□□□ 0.7
GPC3P51654 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.44■□□□□ 0.7
GPC3P51654 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.44■□□□□ 0.7
GPC3P51654 AC116407.2-201ENST00000613639 860 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms