Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
BRCA2P51587 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.56■□□□□ 0.72
BRCA2P51587 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BRCA2P51587 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.56■□□□□ 0.72
BRCA2P51587 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
BRCA2P51587 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.56■□□□□ 0.72
BRCA2P51587 AC027307.3-201ENST00000594262 1100 ntBASIC19.56■□□□□ 0.72
BRCA2P51587 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRCA2P51587 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRCA2P51587 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
BRCA2P51587 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BRCA2P51587 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BRCA2P51587 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.55■□□□□ 0.72
BRCA2P51587 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
BRCA2P51587 KRT18P32-201ENST00000424695 1287 ntBASIC19.55■□□□□ 0.72
BRCA2P51587 RPS2P32-201ENST00000439199 892 ntBASIC19.55■□□□□ 0.72
BRCA2P51587 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.55■□□□□ 0.72
BRCA2P51587 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRCA2P51587 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BRCA2P51587 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.55■□□□□ 0.72
BRCA2P51587 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRCA2P51587 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
BRCA2P51587 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.55■□□□□ 0.72
BRCA2P51587 CU639417.3-201ENST00000624240 1404 ntBASIC19.55■□□□□ 0.72
BRCA2P51587 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.55■□□□□ 0.72
BRCA2P51587 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRCA2P51587 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRCA2P51587 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.55■□□□□ 0.72
BRCA2P51587 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BRCA2P51587 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
BRCA2P51587 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.55■□□□□ 0.72
BRCA2P51587 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.55■□□□□ 0.72
BRCA2P51587 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.55■□□□□ 0.72
BRCA2P51587 AC243562.1-201ENST00000560672 389 ntBASIC19.55■□□□□ 0.72
BRCA2P51587 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.55■□□□□ 0.72
BRCA2P51587 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRCA2P51587 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
BRCA2P51587 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.54■□□□□ 0.72
BRCA2P51587 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
BRCA2P51587 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRCA2P51587 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRCA2P51587 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.54■□□□□ 0.72
BRCA2P51587 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.54■□□□□ 0.72
BRCA2P51587 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.54■□□□□ 0.72
BRCA2P51587 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BRCA2P51587 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BRCA2P51587 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRCA2P51587 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRCA2P51587 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
BRCA2P51587 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRCA2P51587 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRCA2P51587 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
BRCA2P51587 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.54■□□□□ 0.72
BRCA2P51587 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.54■□□□□ 0.72
BRCA2P51587 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRCA2P51587 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BRCA2P51587 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.54■□□□□ 0.72
BRCA2P51587 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
BRCA2P51587 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
BRCA2P51587 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.54■□□□□ 0.72
BRCA2P51587 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRCA2P51587 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRCA2P51587 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.54■□□□□ 0.72
BRCA2P51587 SPDYE14P-201ENST00000442619 822 ntBASIC19.54■□□□□ 0.72
BRCA2P51587 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.54■□□□□ 0.72
BRCA2P51587 AC005332.7-201ENST00000614046 2005 ntBASIC19.54■□□□□ 0.72
BRCA2P51587 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BRCA2P51587 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
BRCA2P51587 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BRCA2P51587 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRCA2P51587 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRCA2P51587 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BRCA2P51587 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BRCA2P51587 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BRCA2P51587 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.53■□□□□ 0.72
BRCA2P51587 IGHV3-72-202ENST00000621503 303 ntBASIC19.53■□□□□ 0.72
BRCA2P51587 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
BRCA2P51587 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BRCA2P51587 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
BRCA2P51587 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRCA2P51587 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BRCA2P51587 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.53■□□□□ 0.72
BRCA2P51587 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.53■□□□□ 0.72
BRCA2P51587 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
BRCA2P51587 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BRCA2P51587 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.53■□□□□ 0.72
BRCA2P51587 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRCA2P51587 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRCA2P51587 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRCA2P51587 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRCA2P51587 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
BRCA2P51587 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.53■□□□□ 0.72
BRCA2P51587 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.53■□□□□ 0.72
BRCA2P51587 AL662799.1-202ENST00000614205 422 ntBASIC19.53■□□□□ 0.72
BRCA2P51587 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRCA2P51587 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
BRCA2P51587 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BRCA2P51587 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.52■□□□□ 0.72
BRCA2P51587 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BRCA2P51587 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms