Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.62■□□□□ 0.25
CLK1P49759 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLK1P49759 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLK1P49759 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.62■□□□□ 0.25
CLK1P49759 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLK1P49759 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLK1P49759 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLK1P49759 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLK1P49759 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLK1P49759 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.62■□□□□ 0.25
CLK1P49759 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CLK1P49759 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLK1P49759 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.62■□□□□ 0.25
CLK1P49759 AC034232.1-201ENST00000506026 1064 ntBASIC16.62■□□□□ 0.25
CLK1P49759 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.62■□□□□ 0.25
CLK1P49759 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.62■□□□□ 0.25
CLK1P49759 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.62■□□□□ 0.25
CLK1P49759 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.62■□□□□ 0.25
CLK1P49759 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.62■□□□□ 0.25
CLK1P49759 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLK1P49759 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLK1P49759 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLK1P49759 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLK1P49759 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLK1P49759 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.62■□□□□ 0.25
CLK1P49759 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLK1P49759 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLK1P49759 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.62■□□□□ 0.25
CLK1P49759 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLK1P49759 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLK1P49759 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLK1P49759 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 AC009102.3-201ENST00000623118 1491 ntBASIC16.61■□□□□ 0.25
CLK1P49759 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.61■□□□□ 0.25
CLK1P49759 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLK1P49759 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLK1P49759 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CLK1P49759 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.61■□□□□ 0.25
CLK1P49759 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLK1P49759 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CLK1P49759 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CLK1P49759 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
CLK1P49759 MIR3917-201ENST00000580971 93 ntBASIC16.61■□□□□ 0.25
CLK1P49759 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.61■□□□□ 0.25
CLK1P49759 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.61■□□□□ 0.25
CLK1P49759 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.61■□□□□ 0.25
CLK1P49759 AC024243.1-201ENST00000609234 778 ntBASIC16.61■□□□□ 0.25
CLK1P49759 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.61■□□□□ 0.25
CLK1P49759 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLK1P49759 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLK1P49759 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.61■□□□□ 0.25
CLK1P49759 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.61■□□□□ 0.25
CLK1P49759 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.61■□□□□ 0.25
CLK1P49759 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.61■□□□□ 0.25
CLK1P49759 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.61■□□□□ 0.25
CLK1P49759 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLK1P49759 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLK1P49759 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.6■□□□□ 0.25
CLK1P49759 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.6■□□□□ 0.25
CLK1P49759 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLK1P49759 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLK1P49759 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.6■□□□□ 0.25
CLK1P49759 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.6■□□□□ 0.25
CLK1P49759 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLK1P49759 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLK1P49759 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CLK1P49759 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLK1P49759 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLK1P49759 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.6■□□□□ 0.25
CLK1P49759 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLK1P49759 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.6■□□□□ 0.25
CLK1P49759 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.6■□□□□ 0.25
CLK1P49759 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.6■□□□□ 0.25
CLK1P49759 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.6■□□□□ 0.25
CLK1P49759 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.6■□□□□ 0.25
CLK1P49759 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.6■□□□□ 0.25
CLK1P49759 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.6■□□□□ 0.25
CLK1P49759 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms