Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CX3CR1P49238 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.54■□□□□ 0.08
CX3CR1P49238 AC112698.1-201ENST00000510299 916 ntBASIC15.54■□□□□ 0.08
CX3CR1P49238 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.54■□□□□ 0.08
CX3CR1P49238 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.54■□□□□ 0.08
CX3CR1P49238 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CX3CR1P49238 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.54■□□□□ 0.08
CX3CR1P49238 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.54■□□□□ 0.08
CX3CR1P49238 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CX3CR1P49238 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.54■□□□□ 0.08
CX3CR1P49238 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.54■□□□□ 0.08
CX3CR1P49238 PCDHA12-202ENST00000613593 2588 ntBASIC15.54■□□□□ 0.08
CX3CR1P49238 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CX3CR1P49238 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.54■□□□□ 0.08
CX3CR1P49238 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CX3CR1P49238 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CX3CR1P49238 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.54■□□□□ 0.08
CX3CR1P49238 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CX3CR1P49238 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CX3CR1P49238 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CX3CR1P49238 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CX3CR1P49238 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CX3CR1P49238 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CX3CR1P49238 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CX3CR1P49238 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CX3CR1P49238 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
CX3CR1P49238 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CX3CR1P49238 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CX3CR1P49238 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.53■□□□□ 0.08
CX3CR1P49238 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CX3CR1P49238 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.53■□□□□ 0.08
CX3CR1P49238 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CX3CR1P49238 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CX3CR1P49238 HBZP1-201ENST00000354915 429 ntBASIC15.53■□□□□ 0.08
CX3CR1P49238 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CX3CR1P49238 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CX3CR1P49238 MIR662-201ENST00000384847 95 ntBASIC15.53■□□□□ 0.08
CX3CR1P49238 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.53■□□□□ 0.08
CX3CR1P49238 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.53■□□□□ 0.08
CX3CR1P49238 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CX3CR1P49238 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.53■□□□□ 0.08
CX3CR1P49238 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CX3CR1P49238 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.53■□□□□ 0.08
CX3CR1P49238 GPR32P1-201ENST00000601788 811 ntBASIC15.53■□□□□ 0.08
CX3CR1P49238 LINC01451-201ENST00000623792 534 ntBASIC15.53■□□□□ 0.08
CX3CR1P49238 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CX3CR1P49238 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CX3CR1P49238 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CX3CR1P49238 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CX3CR1P49238 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CX3CR1P49238 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CX3CR1P49238 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.53■□□□□ 0.08
CX3CR1P49238 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.52■□□□□ 0.08
CX3CR1P49238 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CX3CR1P49238 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CX3CR1P49238 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CX3CR1P49238 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CX3CR1P49238 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.52■□□□□ 0.08
CX3CR1P49238 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.52■□□□□ 0.08
CX3CR1P49238 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CX3CR1P49238 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CX3CR1P49238 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CX3CR1P49238 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CX3CR1P49238 AC108860.2-201ENST00000562760 2183 ntBASIC15.52■□□□□ 0.08
CX3CR1P49238 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CX3CR1P49238 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CX3CR1P49238 AL353692.3-201ENST00000407031 1396 ntBASIC15.52■□□□□ 0.08
CX3CR1P49238 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.52■□□□□ 0.08
CX3CR1P49238 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CX3CR1P49238 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.52■□□□□ 0.08
CX3CR1P49238 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
CX3CR1P49238 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CX3CR1P49238 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.52■□□□□ 0.08
CX3CR1P49238 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CX3CR1P49238 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.52■□□□□ 0.08
CX3CR1P49238 VENTXP5-201ENST00000523979 775 ntBASIC15.52■□□□□ 0.08
CX3CR1P49238 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.52■□□□□ 0.08
CX3CR1P49238 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.52■□□□□ 0.08
CX3CR1P49238 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.52■□□□□ 0.08
CX3CR1P49238 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CX3CR1P49238 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.52■□□□□ 0.08
CX3CR1P49238 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CX3CR1P49238 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CX3CR1P49238 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CX3CR1P49238 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CX3CR1P49238 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.52■□□□□ 0.07
CX3CR1P49238 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CX3CR1P49238 REXO1L11P-201ENST00000620964 1927 ntBASIC15.52■□□□□ 0.07
CX3CR1P49238 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CX3CR1P49238 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CX3CR1P49238 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
CX3CR1P49238 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CX3CR1P49238 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.52■□□□□ 0.07
CX3CR1P49238 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CX3CR1P49238 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CX3CR1P49238 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CX3CR1P49238 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
CX3CR1P49238 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CX3CR1P49238 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CX3CR1P49238 LINC01311-201ENST00000565162 1445 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms