Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.24■□□□□ 0.03
CBX5P45973 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.24■□□□□ 0.03
CBX5P45973 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.24■□□□□ 0.03
CBX5P45973 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX5P45973 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.23■□□□□ 0.03
CBX5P45973 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX5P45973 AC022211.2-201ENST00000585075 2527 ntBASIC15.23■□□□□ 0.03
CBX5P45973 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX5P45973 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.23■□□□□ 0.03
CBX5P45973 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.23■□□□□ 0.03
CBX5P45973 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX5P45973 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CBX5P45973 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CBX5P45973 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX5P45973 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CBX5P45973 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX5P45973 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CBX5P45973 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CBX5P45973 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX5P45973 KRT18P23-201ENST00000435622 1283 ntBASIC15.23■□□□□ 0.03
CBX5P45973 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.23■□□□□ 0.03
CBX5P45973 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CBX5P45973 MIR3180-4-201ENST00000582223 153 ntBASIC15.23■□□□□ 0.03
CBX5P45973 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.23■□□□□ 0.03
CBX5P45973 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CBX5P45973 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX5P45973 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CBX5P45973 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CBX5P45973 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.23■□□□□ 0.03
CBX5P45973 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX5P45973 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX5P45973 MIR600HG-201ENST00000449175 5984 ntBASIC15.23■□□□□ 0.03
CBX5P45973 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX5P45973 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CBX5P45973 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CBX5P45973 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX5P45973 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CBX5P45973 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.22■□□□□ 0.03
CBX5P45973 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.22■□□□□ 0.03
CBX5P45973 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.22■□□□□ 0.03
CBX5P45973 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.22■□□□□ 0.03
CBX5P45973 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CBX5P45973 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
CBX5P45973 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.22■□□□□ 0.03
CBX5P45973 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.22■□□□□ 0.03
CBX5P45973 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.22■□□□□ 0.03
CBX5P45973 RARRES2P10-201ENST00000564312 460 ntBASIC15.22■□□□□ 0.03
CBX5P45973 AF186192.3-201ENST00000583427 947 ntBASIC15.22■□□□□ 0.03
CBX5P45973 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.22■□□□□ 0.03
CBX5P45973 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CBX5P45973 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.22■□□□□ 0.03
CBX5P45973 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.22■□□□□ 0.03
CBX5P45973 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.22■□□□□ 0.03
CBX5P45973 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX5P45973 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.22■□□□□ 0.03
CBX5P45973 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CBX5P45973 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX5P45973 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CBX5P45973 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX5P45973 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.21■□□□□ 0.03
CBX5P45973 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX5P45973 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms