Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSR1P43307 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSR1P43307 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.8■□□□□ 0.6
SSR1P43307 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSR1P43307 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SSR1P43307 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SSR1P43307 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSR1P43307 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSR1P43307 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.8■□□□□ 0.6
SSR1P43307 AC117947.1-201ENST00000427448 529 ntBASIC18.8■□□□□ 0.6
SSR1P43307 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSR1P43307 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.8■□□□□ 0.6
SSR1P43307 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.8■□□□□ 0.6
SSR1P43307 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.8■□□□□ 0.6
SSR1P43307 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.8■□□□□ 0.6
SSR1P43307 AC012306.2-201ENST00000609350 630 ntBASIC18.8■□□□□ 0.6
SSR1P43307 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SSR1P43307 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSR1P43307 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSR1P43307 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSR1P43307 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SSR1P43307 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SSR1P43307 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSR1P43307 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSR1P43307 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.79■□□□□ 0.6
SSR1P43307 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSR1P43307 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSR1P43307 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.79■□□□□ 0.6
SSR1P43307 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SSR1P43307 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
SSR1P43307 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.79■□□□□ 0.6
SSR1P43307 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSR1P43307 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.79■□□□□ 0.6
SSR1P43307 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SSR1P43307 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.79■□□□□ 0.6
SSR1P43307 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSR1P43307 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSR1P43307 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.79■□□□□ 0.6
SSR1P43307 AC092597.1-201ENST00000487352 616 ntBASIC18.79■□□□□ 0.6
SSR1P43307 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSR1P43307 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
SSR1P43307 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.79■□□□□ 0.6
SSR1P43307 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
SSR1P43307 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSR1P43307 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSR1P43307 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSR1P43307 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
SSR1P43307 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SSR1P43307 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSR1P43307 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SSR1P43307 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSR1P43307 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSR1P43307 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SSR1P43307 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSR1P43307 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.79■□□□□ 0.6
SSR1P43307 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSR1P43307 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SSR1P43307 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.79■□□□□ 0.6
SSR1P43307 AC141586.5-201ENST00000624546 2050 ntBASIC18.78■□□□□ 0.6
SSR1P43307 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.78■□□□□ 0.6
SSR1P43307 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSR1P43307 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SSR1P43307 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SSR1P43307 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSR1P43307 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SSR1P43307 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SSR1P43307 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSR1P43307 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSR1P43307 STARP1-201ENST00000397973 869 ntBASIC18.78■□□□□ 0.6
SSR1P43307 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.78■□□□□ 0.6
SSR1P43307 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.78■□□□□ 0.6
SSR1P43307 AL359075.1-203ENST00000462729 1002 ntBASIC18.78■□□□□ 0.6
SSR1P43307 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.78■□□□□ 0.6
SSR1P43307 AC113404.2-201ENST00000507884 177 ntBASIC18.78■□□□□ 0.6
SSR1P43307 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.78■□□□□ 0.6
SSR1P43307 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SSR1P43307 AC116407.2-201ENST00000613639 860 ntBASIC18.78■□□□□ 0.6
SSR1P43307 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SSR1P43307 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSR1P43307 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SSR1P43307 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SSR1P43307 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SSR1P43307 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
SSR1P43307 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSR1P43307 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.77■□□□□ 0.6
SSR1P43307 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SSR1P43307 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
SSR1P43307 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.77■□□□□ 0.6
SSR1P43307 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.77■□□□□ 0.6
SSR1P43307 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SSR1P43307 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SSR1P43307 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SSR1P43307 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SSR1P43307 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SSR1P43307 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.77■□□□□ 0.6
SSR1P43307 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SSR1P43307 AC092647.4-201ENST00000457211 535 ntBASIC18.77■□□□□ 0.6
SSR1P43307 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SSR1P43307 ZNF444P1-201ENST00000559497 298 ntBASIC18.77■□□□□ 0.6
SSR1P43307 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms