Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.4■□□□□ 0.06
GDNFP39905 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.4■□□□□ 0.06
GDNFP39905 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.4■□□□□ 0.06
GDNFP39905 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.4■□□□□ 0.06
GDNFP39905 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.4■□□□□ 0.06
GDNFP39905 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
GDNFP39905 CA15P1-201ENST00000481698 905 ntBASIC15.4■□□□□ 0.06
GDNFP39905 AL023803.3-201ENST00000615559 522 ntBASIC15.4■□□□□ 0.06
GDNFP39905 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
GDNFP39905 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.4■□□□□ 0.06
GDNFP39905 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
GDNFP39905 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.4■□□□□ 0.06
GDNFP39905 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.4■□□□□ 0.06
GDNFP39905 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
GDNFP39905 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
GDNFP39905 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
GDNFP39905 AC034236.2-201ENST00000606662 1610 ntBASIC15.39■□□□□ 0.05
GDNFP39905 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GDNFP39905 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDNFP39905 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDNFP39905 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
GDNFP39905 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
GDNFP39905 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GDNFP39905 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
GDNFP39905 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDNFP39905 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDNFP39905 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDNFP39905 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDNFP39905 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
GDNFP39905 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
GDNFP39905 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.39■□□□□ 0.05
GDNFP39905 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GDNFP39905 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.39■□□□□ 0.05
GDNFP39905 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.39■□□□□ 0.05
GDNFP39905 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.39■□□□□ 0.05
GDNFP39905 AC010947.1-201ENST00000623454 693 ntBASIC15.39■□□□□ 0.05
GDNFP39905 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.39■□□□□ 0.05
GDNFP39905 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
GDNFP39905 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
GDNFP39905 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
GDNFP39905 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.39■□□□□ 0.05
GDNFP39905 LINC00304-203ENST00000565008 1864 ntBASIC15.39■□□□□ 0.05
GDNFP39905 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDNFP39905 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDNFP39905 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.39■□□□□ 0.05
GDNFP39905 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDNFP39905 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDNFP39905 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDNFP39905 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDNFP39905 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.39■□□□□ 0.05
GDNFP39905 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GDNFP39905 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GDNFP39905 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
GDNFP39905 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GDNFP39905 AC008741.2-201ENST00000612792 3115 ntBASIC15.39■□□□□ 0.05
GDNFP39905 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
GDNFP39905 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GDNFP39905 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
GDNFP39905 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDNFP39905 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.38■□□□□ 0.05
GDNFP39905 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
GDNFP39905 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GDNFP39905 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
GDNFP39905 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.38■□□□□ 0.05
GDNFP39905 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
GDNFP39905 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDNFP39905 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDNFP39905 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.38■□□□□ 0.05
GDNFP39905 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.38■□□□□ 0.05
GDNFP39905 AP003041.3-201ENST00000527151 707 ntBASIC15.38■□□□□ 0.05
GDNFP39905 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.38■□□□□ 0.05
GDNFP39905 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
GDNFP39905 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GDNFP39905 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.38■□□□□ 0.05
GDNFP39905 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDNFP39905 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDNFP39905 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDNFP39905 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.38■□□□□ 0.05
GDNFP39905 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GDNFP39905 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
GDNFP39905 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms