Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.6■□□□□ 0.57
PCK1P35558 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
PCK1P35558 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.6■□□□□ 0.57
PCK1P35558 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PCK1P35558 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCK1P35558 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.6■□□□□ 0.57
PCK1P35558 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCK1P35558 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCK1P35558 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCK1P35558 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PCK1P35558 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCK1P35558 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCK1P35558 LINC00304-203ENST00000565008 1864 ntBASIC18.6■□□□□ 0.57
PCK1P35558 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCK1P35558 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCK1P35558 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCK1P35558 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCK1P35558 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCK1P35558 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCK1P35558 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCK1P35558 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.59■□□□□ 0.57
PCK1P35558 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCK1P35558 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCK1P35558 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCK1P35558 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
PCK1P35558 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCK1P35558 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PCK1P35558 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCK1P35558 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.59■□□□□ 0.57
PCK1P35558 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCK1P35558 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCK1P35558 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCK1P35558 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCK1P35558 LINC01451-201ENST00000623792 534 ntBASIC18.59■□□□□ 0.57
PCK1P35558 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCK1P35558 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCK1P35558 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCK1P35558 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PCK1P35558 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCK1P35558 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCK1P35558 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCK1P35558 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.59■□□□□ 0.57
PCK1P35558 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCK1P35558 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCK1P35558 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PCK1P35558 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCK1P35558 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
PCK1P35558 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PCK1P35558 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCK1P35558 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCK1P35558 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCK1P35558 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCK1P35558 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCK1P35558 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCK1P35558 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCK1P35558 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PCK1P35558 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.58■□□□□ 0.56
PCK1P35558 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.58■□□□□ 0.56
PCK1P35558 FAM210CP-201ENST00000445714 574 ntBASIC18.58■□□□□ 0.56
PCK1P35558 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCK1P35558 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCK1P35558 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.58■□□□□ 0.56
PCK1P35558 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.58■□□□□ 0.56
PCK1P35558 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.58■□□□□ 0.56
PCK1P35558 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.58■□□□□ 0.56
PCK1P35558 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.58■□□□□ 0.56
PCK1P35558 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.58■□□□□ 0.56
PCK1P35558 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PCK1P35558 AL139384.1-201ENST00000612143 3047 ntBASIC18.58■□□□□ 0.56
PCK1P35558 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCK1P35558 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCK1P35558 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCK1P35558 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCK1P35558 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PCK1P35558 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCK1P35558 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.58■□□□□ 0.56
PCK1P35558 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCK1P35558 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.57■□□□□ 0.56
PCK1P35558 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCK1P35558 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.57■□□□□ 0.56
PCK1P35558 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.57■□□□□ 0.56
PCK1P35558 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCK1P35558 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.57■□□□□ 0.56
PCK1P35558 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCK1P35558 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCK1P35558 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCK1P35558 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCK1P35558 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCK1P35558 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.57■□□□□ 0.56
PCK1P35558 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCK1P35558 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCK1P35558 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCK1P35558 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.57■□□□□ 0.56
PCK1P35558 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCK1P35558 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCK1P35558 AL031133.1-201ENST00000406807 723 ntBASIC18.57■□□□□ 0.56
PCK1P35558 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.57■□□□□ 0.56
PCK1P35558 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCK1P35558 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.57■□□□□ 0.56
PCK1P35558 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms