Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPA3P35244 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.86■□□□□ 0.45
RPA3P35244 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPA3P35244 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RPA3P35244 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RPA3P35244 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPA3P35244 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
RPA3P35244 REXO1L11P-201ENST00000620964 1927 ntBASIC17.86■□□□□ 0.45
RPA3P35244 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPA3P35244 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.86■□□□□ 0.45
RPA3P35244 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPA3P35244 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
RPA3P35244 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RPA3P35244 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.86■□□□□ 0.45
RPA3P35244 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPA3P35244 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPA3P35244 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
RPA3P35244 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPA3P35244 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPA3P35244 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPA3P35244 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPA3P35244 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPA3P35244 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.85■□□□□ 0.45
RPA3P35244 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPA3P35244 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPA3P35244 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.85■□□□□ 0.45
RPA3P35244 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPA3P35244 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPA3P35244 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPA3P35244 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPA3P35244 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.85■□□□□ 0.45
RPA3P35244 RNF152P1-201ENST00000397754 604 ntBASIC17.85■□□□□ 0.45
RPA3P35244 FAM210CP-201ENST00000445714 574 ntBASIC17.85■□□□□ 0.45
RPA3P35244 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.85■□□□□ 0.45
RPA3P35244 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.85■□□□□ 0.45
RPA3P35244 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPA3P35244 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPA3P35244 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.85■□□□□ 0.45
RPA3P35244 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPA3P35244 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.85■□□□□ 0.45
RPA3P35244 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPA3P35244 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.85■□□□□ 0.45
RPA3P35244 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.85■□□□□ 0.45
RPA3P35244 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPA3P35244 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
RPA3P35244 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPA3P35244 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPA3P35244 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPA3P35244 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPA3P35244 AC105020.1-201ENST00000435356 2205 ntBASIC17.84■□□□□ 0.45
RPA3P35244 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPA3P35244 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPA3P35244 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.84■□□□□ 0.45
RPA3P35244 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPA3P35244 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RPA3P35244 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPA3P35244 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPA3P35244 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
RPA3P35244 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.84■□□□□ 0.45
RPA3P35244 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RPA3P35244 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPA3P35244 AC104076.2-201ENST00000448912 469 ntBASIC17.84■□□□□ 0.45
RPA3P35244 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.84■□□□□ 0.45
RPA3P35244 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPA3P35244 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPA3P35244 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.84■□□□□ 0.45
RPA3P35244 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.84■□□□□ 0.45
RPA3P35244 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.84■□□□□ 0.45
RPA3P35244 MIR3180-4-201ENST00000582223 153 ntBASIC17.84■□□□□ 0.45
RPA3P35244 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RPA3P35244 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.84■□□□□ 0.45
RPA3P35244 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RPA3P35244 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPA3P35244 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPA3P35244 PCDHA14-201ENST00000506751 2298 ntBASIC17.84■□□□□ 0.45
RPA3P35244 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.84■□□□□ 0.45
RPA3P35244 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
RPA3P35244 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPA3P35244 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RPA3P35244 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RPA3P35244 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPA3P35244 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPA3P35244 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPA3P35244 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPA3P35244 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.84■□□□□ 0.45
RPA3P35244 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RPA3P35244 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RPA3P35244 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RPA3P35244 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RPA3P35244 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
RPA3P35244 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RPA3P35244 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RPA3P35244 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
RPA3P35244 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RPA3P35244 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RPA3P35244 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RPA3P35244 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPA3P35244 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RPA3P35244 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RPA3P35244 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms