Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
LSP1P33241 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.74■□□□□ 0.43
LSP1P33241 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.74■□□□□ 0.43
LSP1P33241 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LSP1P33241 AC022898.2-201ENST00000616822 1312 ntBASIC17.73■□□□□ 0.43
LSP1P33241 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LSP1P33241 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSP1P33241 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSP1P33241 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSP1P33241 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSP1P33241 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.73■□□□□ 0.43
LSP1P33241 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LSP1P33241 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.73■□□□□ 0.43
LSP1P33241 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSP1P33241 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LSP1P33241 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LSP1P33241 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LSP1P33241 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSP1P33241 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSP1P33241 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LSP1P33241 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSP1P33241 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LSP1P33241 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.73■□□□□ 0.43
LSP1P33241 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.73■□□□□ 0.43
LSP1P33241 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LSP1P33241 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.73■□□□□ 0.43
LSP1P33241 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.73■□□□□ 0.43
LSP1P33241 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.73■□□□□ 0.43
LSP1P33241 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.73■□□□□ 0.43
LSP1P33241 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.73■□□□□ 0.43
LSP1P33241 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
LSP1P33241 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
LSP1P33241 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.73■□□□□ 0.43
LSP1P33241 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LSP1P33241 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSP1P33241 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSP1P33241 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LSP1P33241 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
LSP1P33241 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSP1P33241 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.73■□□□□ 0.43
LSP1P33241 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
LSP1P33241 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSP1P33241 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.72■□□□□ 0.43
LSP1P33241 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.72■□□□□ 0.43
LSP1P33241 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.72■□□□□ 0.43
LSP1P33241 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSP1P33241 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.72■□□□□ 0.43
LSP1P33241 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.72■□□□□ 0.43
LSP1P33241 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSP1P33241 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSP1P33241 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LSP1P33241 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LSP1P33241 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.72■□□□□ 0.43
LSP1P33241 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.72■□□□□ 0.43
LSP1P33241 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSP1P33241 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.72■□□□□ 0.43
LSP1P33241 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.72■□□□□ 0.43
LSP1P33241 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LSP1P33241 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSP1P33241 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSP1P33241 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LSP1P33241 HLA-L-209ENST00000420110 1011 ntBASIC17.72■□□□□ 0.43
LSP1P33241 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.72■□□□□ 0.43
LSP1P33241 TSPY6P-201ENST00000448518 926 ntBASIC17.72■□□□□ 0.43
LSP1P33241 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.72■□□□□ 0.43
LSP1P33241 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.72■□□□□ 0.43
LSP1P33241 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.72■□□□□ 0.43
LSP1P33241 MIR4758-201ENST00000577688 71 ntBASIC17.72■□□□□ 0.43
LSP1P33241 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.72■□□□□ 0.43
LSP1P33241 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
LSP1P33241 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSP1P33241 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LSP1P33241 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LSP1P33241 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSP1P33241 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LSP1P33241 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.72■□□□□ 0.43
LSP1P33241 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LSP1P33241 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.72■□□□□ 0.43
LSP1P33241 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LSP1P33241 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.72■□□□□ 0.43
LSP1P33241 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LSP1P33241 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSP1P33241 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.71■□□□□ 0.43
LSP1P33241 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
LSP1P33241 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSP1P33241 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSP1P33241 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LSP1P33241 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.71■□□□□ 0.43
LSP1P33241 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LSP1P33241 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.71■□□□□ 0.43
LSP1P33241 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSP1P33241 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
LSP1P33241 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSP1P33241 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LSP1P33241 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSP1P33241 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.71■□□□□ 0.43
LSP1P33241 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSP1P33241 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LSP1P33241 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LSP1P33241 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms