Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC8P31273 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXC8P31273 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXC8P31273 AC009113.1-201ENST00000570267 2443 ntBASIC19.1■□□□□ 0.65
HOXC8P31273 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC8P31273 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC8P31273 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC8P31273 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC8P31273 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC8P31273 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXC8P31273 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC8P31273 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC8P31273 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC8P31273 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC8P31273 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HOXC8P31273 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.1■□□□□ 0.65
HOXC8P31273 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.1■□□□□ 0.65
HOXC8P31273 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.1■□□□□ 0.65
HOXC8P31273 RFPL4AP1-201ENST00000530883 850 ntBASIC19.1■□□□□ 0.65
HOXC8P31273 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.1■□□□□ 0.65
HOXC8P31273 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HOXC8P31273 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.1■□□□□ 0.65
HOXC8P31273 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HOXC8P31273 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.1■□□□□ 0.65
HOXC8P31273 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXC8P31273 AC027612.4-201ENST00000605371 583 ntBASIC19.1■□□□□ 0.65
HOXC8P31273 AL139327.4-201ENST00000612362 153 ntBASIC19.1■□□□□ 0.65
HOXC8P31273 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXC8P31273 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXC8P31273 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC8P31273 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC8P31273 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXC8P31273 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXC8P31273 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC8P31273 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC8P31273 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC8P31273 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC8P31273 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC8P31273 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC8P31273 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
HOXC8P31273 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC8P31273 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HOXC8P31273 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC8P31273 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC8P31273 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
HOXC8P31273 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC8P31273 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC8P31273 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.09■□□□□ 0.65
HOXC8P31273 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
HOXC8P31273 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.09■□□□□ 0.65
HOXC8P31273 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
HOXC8P31273 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.09■□□□□ 0.65
HOXC8P31273 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.09■□□□□ 0.65
HOXC8P31273 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC8P31273 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
HOXC8P31273 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC8P31273 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.09■□□□□ 0.65
HOXC8P31273 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.09■□□□□ 0.65
HOXC8P31273 AC091812.2-201ENST00000619081 385 ntBASIC19.09■□□□□ 0.65
HOXC8P31273 AC092902.6-201ENST00000641783 218 ntBASIC19.09■□□□□ 0.65
HOXC8P31273 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC8P31273 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC8P31273 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC8P31273 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC8P31273 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC8P31273 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HOXC8P31273 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
HOXC8P31273 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC8P31273 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC8P31273 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.08■□□□□ 0.65
HOXC8P31273 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC8P31273 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
HOXC8P31273 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC8P31273 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC8P31273 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.08■□□□□ 0.65
HOXC8P31273 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.08■□□□□ 0.65
HOXC8P31273 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC8P31273 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC8P31273 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC8P31273 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
HOXC8P31273 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC8P31273 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
HOXC8P31273 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.08■□□□□ 0.64
HOXC8P31273 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.08■□□□□ 0.64
HOXC8P31273 FAM58CP-201ENST00000435741 640 ntBASIC19.08■□□□□ 0.64
HOXC8P31273 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC8P31273 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC8P31273 SLC25A6P2-201ENST00000497974 877 ntBASIC19.08■□□□□ 0.64
HOXC8P31273 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
HOXC8P31273 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.08■□□□□ 0.64
HOXC8P31273 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.08■□□□□ 0.64
HOXC8P31273 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.08■□□□□ 0.64
HOXC8P31273 LINC01451-201ENST00000623792 534 ntBASIC19.08■□□□□ 0.64
HOXC8P31273 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.08■□□□□ 0.64
HOXC8P31273 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC8P31273 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC8P31273 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC8P31273 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.08■□□□□ 0.64
HOXC8P31273 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.08■□□□□ 0.64
HOXC8P31273 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms